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Genomics

The gene structure and other genome annotation in PhytoMine are provided by a variety of curated source databases. In most cases PhytoMine includes all genome features that have chromosomal locations.
Data sets
Bulk download

Phytomine contains genomic data from the JGI flagship genomes:

We also have sequenced and annotation individual Brachypodium distachyon lines as part of the BrachyPan project: In addition, we have also included genomes from the model organism community and colloaborators, and previous releases of data:
Bulk data files for all organisms in Phytozome are available for download from the JGI Download Portal .
Related template queries

CDS sequence for a specific transcript

Peptide sequence for a specific transcript

Nucleotide sequence for a specific transcript

Query starting points

These links will take you to the Query Builder pages which allow you to make new queries and create template queries of your own