Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 122042534

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  48

48 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000004 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) R. communis v0.1 1646   30076: 24913-26558
Cucsa.348630 (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. sativus v1.0 2490   scaffold03487: 78365-80854
orange1.1g023688m.g (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. sinensis v1.1 2095   scaffold00001: 3340765-3342859
AT2G46780 (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. thaliana TAIR10 2213   Chr2: 19229293-19231505
Thhalv10001545m.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) E. salsugineum v1.0 2211   scaffold_22: 1378449-1380659
Ciclev10021586m.g (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. clementina v1.0 2385   scaffold_3: 47620774-47623158
Lus10002684.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 1731   scaffold1347: 69781-71511
Lus10030202.g (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 1746   scaffold217: 200834-202579
Gorai.001G150700 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. raimondii v2.1 3081   Chr01: 20874015-20877095
Gorai.004G124700 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. raimondii v2.1 2364   Chr04: 32508395-32510758
Gorai.007G112700 (1 of 12) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. raimondii v2.1 2481   Chr07: 8742464-8744944
Thecc1EG005042 (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) T. cacao v1.1 3042   scaffold_1: 34750648-34753689
Thecc1EG015501 (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) T. cacao v1.1 2580   scaffold_3: 28241720-28244299
Araha.8989s0002 (1 of 10) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. halleri v1.1 2363   Scaffold8989: 20641-23003
Cagra.0050s0023 (1 of 8) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) C. grandiflora v1.1 2353   Scaffold50: 77823-80175
Glyma.07G050700 (1 of 16) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. max Wm82.a2.v1 3626   Chr07: 4376298-4379923
Glyma.16G019500 (1 of 16) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) G. max Wm82.a2.v1 3244   Chr16: 1767765-1771008
Brara.E00103 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 2208   A05: 604445-606652
Brara.D02818 (1 of 16) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) B. rapa FPsc v1.3 2226   A04: 21316255-21318480
Bostr.25993s0089 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) B. stricta v1.2 2291   Scaffold25993: 438342-440632
Medtr8g024520 (1 of 5) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) M. truncatula Mt4.0v1 3212   chr8: 9035953-9039164
SapurV1A.1632s0040 (1 of 18) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) S. purpurea v1.0 2343   chr12: 366284-368626
SapurV1A.0162s0250 (1 of 18) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) S. purpurea v1.0 3063   chr14: 7935634-7938696
SapurV1A.0003s0520 (1 of 18) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) S. purpurea v1.0 2966   chr02: 14090337-14093302
evm_27.TU.AmTr_v1.0_scaffold00113.25 (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A. trichopoda v1.0 1921   AmTr_v1.0_scaffold00113: 1509394-1511314
Eucgr.A01415 (1 of 8) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) E. grandis v2.0 2142   Chr01: 29423611-29425752
Prupe.2G318000 (1 of 7) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) P. persica v2.1 2871   Pp02: 29758020-29760890
Manes.05G016900 (1 of 14) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) M. esculenta v6.1 3246   Chromosome05: 1213560-1216805
Manes.01G240400 (1 of 14) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) M. esculenta v6.1 3005   Chromosome01: 32002795-32005799
Kalax.0158s0009 (1 of 15) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) K. laxiflora v1.1 1405   scaffold_158: 149266-150670

48 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.348630.1 C. sativus v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
orange1.1g023688m C. sinensis v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Ciclev10021586m C. clementina v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Lus10030202 L. usitatissimum v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Lus10002684 L. usitatissimum v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Araha.8989s0002.1.p A. halleri v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Cagra.0050s0023.1.p C. grandiflora v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Brara.E00103.1.p B. rapa FPsc v1.3 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Bostr.25993s0089.1.p B. stricta v1.2 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
SapurV1A.0003s0520.1.p S. purpurea v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00113.25 A. trichopoda v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Eucgr.A01415.1.p E. grandis v2.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Prupe.2G318000.1.p P. persica v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Manes.05G016900.1.p M. esculenta v6.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Manes.01G240400.1.p M. esculenta v6.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Kalax.0158s0009.1.p K. laxiflora v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Kaladp0085s0152.1.p K. fedtschenkoi v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA26149 T. pratense v2 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Phvul.010G118600.1.p P. vulgaris v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Podel.12G026300.1.p P. deltoides WV94 v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Podel.02G198100.1.p P. deltoides WV94 v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
MD07G1298100 M. domestica v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm
Ca_22428 C. arietinum v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
30076.m004440 R. communis v0.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
AT2G46780.1 A. thaliana TAIR10 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Thhalv10001545m E. salsugineum v1.0 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5273 Angiosperm
Gorai.001G150700.1 G. raimondii v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Gorai.004G124700.1 G. raimondii v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Gorai.007G112700.1 G. raimondii v2.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5273 Angiosperm
Thecc1EG015501t1 T. cacao v1.1 122042534 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5273 Angiosperm