Protein Family : zinc finger (C3HC4-type RING finger) family protein 122796967

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  359

359 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29739.t000121 (1 of 4) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) R. communis v0.1 1327   29739: 751955-753281
29739.t000122 (1 of 4) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) R. communis v0.1 1783   29739: 754921-756703
30000.t000017 (1 of 2) PTHR11685//PTHR11685:SF146 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED R. communis v0.1 873   30000: 163820-164692
30000.t000019 (1 of 2) PTHR11685//PTHR11685:SF146 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED R. communis v0.1 2195   30000: 170195-172389
30111.t000007 (1 of 1) PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED R. communis v0.1 2705   30111: 58992-61696
30131.t000070 (1 of 4) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) R. communis v0.1 1320   30131: 397854-399173
Cucsa.052730 (1 of 3) PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED C. sativus v1.0 3891   scaffold00577: 191704-195594
Cucsa.106150 (1 of 3) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sativus v1.0 644   scaffold00929: 558019-558662
Cucsa.149270 (1 of 3) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sativus v1.0 1113   scaffold01110: 128960-130072
Cucsa.207410 (1 of 3) PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED C. sativus v1.0 3513   scaffold01443: 244637-248149
Cucsa.236890 (1 of 3) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sativus v1.0 875   scaffold02023: 16731-17605
orange1.1g043988m.g (1 of 7) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sinensis v1.1 456   scaffold07088: 1574-2029
orange1.1g019929m.g (1 of 7) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sinensis v1.1 3262   scaffold00013: 1301661-1304922
orange1.1g048114m.g (1 of 7) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sinensis v1.1 809   scaffold00013: 1312690-1313498
orange1.1g025608m.g (1 of 7) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sinensis v1.1 1495   scaffold00013: 1307196-1308690
orange1.1g024566m.g (1 of 8) PTHR11685//PTHR11685:SF146 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING C. sinensis v1.1 2512   scaffold00162: 99649-102160
orange1.1g008441m.g (1 of 1) PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED C. sinensis v1.1 3797   scaffold00014: 1278247-1282043
AT5G37560 (1 of 19) PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED A. thaliana TAIR10 1805   Chr5: 14921986-14923790
AT5G60250 (1 of 5) PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) A. thaliana TAIR10 2692   Chr5: 24252158-24254849
AT3G45540 (1 of 2) PF00097//PF01485 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) A. thaliana TAIR10 1338   Chr3: 16706312-16707649
AT3G45470 (1 of 2) PF00097//PF01485 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) A. thaliana TAIR10 757   Chr3: 16680505-16681261
AT3G14250 (1 of 2) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) A. thaliana TAIR10 1033   Chr3: 4745926-4746958
AT3G53690 (1 of 2) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) A. thaliana TAIR10 1278   Chr3: 19898788-19900065
AT3G45555 (1 of 19) PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED A. thaliana TAIR10 642   Chr3: 16712368-16713009
AT2G25360 (1 of 16) K11968 - ariadne-1 (ARIH1) A. thaliana TAIR10 1513   Chr2: 10804249-10805761
AT2G19610 (1 of 19) PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED A. thaliana TAIR10 2147   Chr2: 8483940-8486086
Thhalv10021941m.g (1 of 5) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING E. salsugineum v1.0 489   scaffold_13: 4626542-4627030
Thhalv10022329m.g (1 of 5) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING E. salsugineum v1.0 977   scaffold_13: 4633570-4634546
Thhalv10000449m.g (1 of 3) PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) E. salsugineum v1.0 2352   scaffold_15: 7053195-7055546
Thhalv10012895m.g (1 of 3) PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) E. salsugineum v1.0 2687   scaffold_2: 8116340-8119026

359 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30000.m000387 R. communis v0.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
30111.m000704 R. communis v0.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
30131.m006919 R. communis v0.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
Cucsa.052730.1 C. sativus v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 5 5272 Eudicot
Cucsa.149270.1 C. sativus v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 5 5272 Eudicot
orange1.1g008441m C. sinensis v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
orange1.1g024566m C. sinensis v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
AT2G25360.1 A. thaliana TAIR10 122796967 zinc finger (C3HC4-type RING finger) family protein 9 5272 Eudicot
AT5G60250.1 A. thaliana TAIR10 122796967 zinc finger (C3HC4-type RING finger) family protein 9 5272 Eudicot
Thhalv10000966m E. salsugineum v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 8 5272 Eudicot
Thhalv10015687m E. salsugineum v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 8 5272 Eudicot
Thhalv10000449m E. salsugineum v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 8 5272 Eudicot
Ciclev10009160m C. clementina v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 13 5272 Eudicot
Ciclev10024204m C. clementina v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 13 5272 Eudicot
Ciclev10023510m C. clementina v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 13 5272 Eudicot
Ciclev10023377m C. clementina v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 13 5272 Eudicot
Ciclev10028109m C. clementina v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 13 5272 Eudicot
Lus10026104 L. usitatissimum v1.0 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Gorai.010G095900.1 G. raimondii v2.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Gorai.009G149000.1 G. raimondii v2.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Thecc1EG037456t2 T. cacao v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Thecc1EG041093t2 T. cacao v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Thecc1EG029275t1 T. cacao v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Thecc1EG029274t1 T. cacao v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 7 5272 Eudicot
Araha.14832s0002.1.p A. halleri v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 6 5272 Eudicot
Cagra.2858s0007.1.p C. grandiflora v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 10 5272 Eudicot
Cagra.1582s0007.1.p C. grandiflora v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 10 5272 Eudicot
Cagra.8372s0017.1.p C. grandiflora v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 10 5272 Eudicot
Cagra.0542s0019.1.p C. grandiflora v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 10 5272 Eudicot
Cagra.0612s0093.1.p C. grandiflora v1.1 122796967 zinc finger (C3HC4-type RING finger) family protein 10 5272 Eudicot