Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 122790614

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  49

49 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29154.t000007 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 2021   29154: 43495-45515
Cucsa.075310 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 964   scaffold00789: 49109-50072
AT3G46020 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1007   Chr3: 16912344-16913350
Thhalv10015391m.g (1 of 230) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. salsugineum v1.0 525   scaffold_2: 8272439-8272963
Thhalv10002983m.g (1 of 230) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. salsugineum v1.0 383   scaffold_4: 9301194-9301576
Ciclev10029673m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1736   scaffold_8: 23133455-23135190
Lus10040854.g (1 of 1) PTHR15241:SF2 - RNA-BINDING REGION RNP-1 DOMAIN-CONTAINING PROTEIN L. usitatissimum v1.0 969   scaffold156: 1844230-1845198
Gorai.009G091800 (1 of 310) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. raimondii v2.1 2350   Chr09: 6705370-6707719
Migut.N02899 (1 of 1) PTHR23147//PTHR23147:SF10 - SERINE/ARGININE RICH SPLICING FACTOR M. guttatus v2.0 1177   scaffold_14: 24010345-24011521
Araha.12798s0012 (1 of 3) PTHR23147//PTHR23147:SF6 - SERINE/ARGININE RICH SPLICING FACTOR A. halleri v1.1 2090   Scaffold12798: 42197-44286
Araha.31777s0001 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. halleri v1.1 848   Scaffold31777: 788-1635
Cagra.1317s0029 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 812   Scaffold1317: 107270-108081
Glyma.13G333700 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 2741   Chr13: 42766642-42769382
Glyma.15G040500 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 2728   Chr15: 3184945-3187672
Brara.B01061 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1232   A02: 5267951-5269182
Bostr.18473s0338 (1 of 9) KOG0114 - Predicted RNA-binding protein (RRM superfamily) B. stricta v1.2 1753   Scaffold18473: 1844009-1845761
Medtr2g096560 (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. truncatula Mt4.0v1 2607   chr2: 41240036-41242642
SapurV1A.0008s1000 (1 of 323) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) S. purpurea v1.0 2288   chr16: 12817217-12819504
Eucgr.J02066 (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. grandis v2.0 2052   Chr10: 25858920-25860971
Prupe.6G082600 (1 of 201) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. persica v2.1 1512   Pp06: 5559491-5561002
Prupe.2G070500 (1 of 201) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. persica v2.1 781   Pp02: 10123083-10123863
Prupe.1G207800 (1 of 201) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. persica v2.1 790   Pp01: 21338916-21339705
Manes.11G133600 (1 of 258) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. esculenta v6.1 4330   Chromosome11: 24499621-24503950
Kalax.0004s0136 (1 of 490) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) K. laxiflora v1.1 2756   scaffold_4: 1142627-1145382
Kalax.0545s0030 (1 of 490) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) K. laxiflora v1.1 2775   scaffold_545: 207364-210138
Aqcoe2G179700 (1 of 213) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. coerulea v3.1 5902   Chr_02: 22057069-22062970
Kaladp0058s0636 (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) K. fedtschenkoi v1.1 2693   Scaffold_58: 4535218-4537910
AL372U10010 (1 of 2) PTHR23147//PTHR23147:SF10 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED A. lyrata v2.1 661   scaffold_372: 1-661
AL5G24740 (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) A. lyrata v2.1 962   scaffold_5: 12357877-12358838
AL8G36420 (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) A. lyrata v2.1 1030   scaffold_8: 19307422-19308451

49 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10029673m C. clementina v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Araha.12798s0012.1.p A. halleri v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Migut.N02899.1.p M. guttatus v2.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Bostr.18473s0338.1.p B. stricta v1.2 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
SapurV1A.0008s1000.1.p S. purpurea v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Eucgr.J02066.1.p E. grandis v2.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Prupe.2G070500.1.p P. persica v2.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5272 Eudicot
Kalax.0004s0136.1.p K. laxiflora v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Kalax.0545s0030.1.p K. laxiflora v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Aqcoe2G179700.1.p A. coerulea v3.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Kaladp0058s0636.1.p K. fedtschenkoi v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
AUR62038759-RA C. quinoa v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5272 Eudicot
AUR62036629-RA C. quinoa v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5272 Eudicot
Potri.001G236200.1.p P. trichocarpa v3.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Podel.T128400.1.p P. deltoides WV94 v2.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5272 Eudicot
Podel.05G183400.1.p P. deltoides WV94 v2.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5272 Eudicot
Lsat_1_v5_gn_8_77780.1 L. sativa V8 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
MD03G1098400 M. domestica v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
HanXRQChr08g0231641 H. annuus r1.2 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
gene36372-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
29154.m000213 R. communis v0.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Cucsa.075310.1 C. sativus v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
AT3G46020.1 A. thaliana TAIR10 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Thhalv10002983m E. salsugineum v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Thhalv10015391m E. salsugineum v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Lus10040854 L. usitatissimum v1.0 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Gorai.009G091800.1 G. raimondii v2.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Araha.31777s0001.1.p A. halleri v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Cagra.1317s0029.1.p C. grandiflora v1.1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Glyma.13G333700.1.p G. max Wm82.a2.v1 122790614 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot