Protein Family : PNAS-3 related 122789639

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  59
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59 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000227 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) R. communis v0.1 4176   30147: 3624497-3628672
Cucsa.196930 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. sativus v1.0 3722   scaffold01357: 489439-493160
orange1.1g026458m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. sinensis v1.1 3736   scaffold00020: 1108951-1112686
AT4G32175 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. thaliana TAIR10 2130   Chr4: 15535473-15537602
AT2G25355 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. thaliana TAIR10 2445   Chr2: 10801278-10803722
Thhalv10026115m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 E. salsugineum v1.0 2108   scaffold_1: 3331005-3333112
Ciclev10021986m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. clementina v1.0 3849   scaffold_3: 3032787-3036635
Lus10042121.g (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 L. usitatissimum v1.0 2124   scaffold123: 795611-797734
Lus10002375.g (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 L. usitatissimum v1.0 2152   scaffold2788: 65869-68020
Lus10000238.g (1 of 4) PTHR21321 - PNAS-3 RELATED L. usitatissimum v1.0 1347   C8380905: 2467-3813
Gorai.005G137000 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 G. raimondii v2.1 3573   Chr05: 35429403-35432975
Thecc1EG012055 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) T. cacao v1.1 5450   scaffold_3: 662141-667590
Migut.I00016 (1 of 1) PTHR21321:SF1 - EXOSOME COMPLEX COMPONENT RRP40 M. guttatus v2.0 3257   scaffold_9: 147948-151204
Araha.8415s0002 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 A. halleri v1.1 2368   Scaffold8415: 3434-5801
Araha.8819s0023 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 A. halleri v1.1 2060   Scaffold8819: 74968-77027
Cagra.2471s0008 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. grandiflora v1.1 1791   Scaffold2471: 22361-24151
Cagra.3304s0001 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. grandiflora v1.1 2314   Scaffold3304: 4290-6603
Glyma.01G053700 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 G. max Wm82.a2.v1 5795   Chr01: 6798695-6804489
Glyma.02G112000 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 G. max Wm82.a2.v1 6407   Chr02: 10852955-10859361
Glyma.19G045000 (1 of 6) PTHR21321 - PNAS-3 RELATED G. max Wm82.a2.v1 4095   Chr19: 6685355-6689449
Brara.H01321 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 B. rapa FPsc v1.3 1966   A08: 14372794-14374759
Bostr.7867s1072 (1 of 3) PTHR21321 - PNAS-3 RELATED B. stricta v1.2 2698   Scaffold7867: 5442543-5445240
Bostr.26326s0122 (1 of 3) PTHR21321 - PNAS-3 RELATED B. stricta v1.2 2390   Scaffold26326: 1470026-1472415
Medtr5g009430 (1 of 4) PTHR21321 - PNAS-3 RELATED M. truncatula Mt4.0v1 1301   chr5: 2252809-2254109
Medtr5g043110 (1 of 1) PTHR21321:SF1 - EXOSOME COMPLEX COMPONENT RRP40 M. truncatula Mt4.0v1 4938   chr5: 18943638-18948575
SapurV1A.0165s0010 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) S. purpurea v1.0 9159   chr12: 7214000-7223158
SapurV1A.1404s0010 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) S. purpurea v1.0 9158   chr12: 7345606-7354763
Eucgr.B00371 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 E. grandis v2.0 5804   Chr02: 3591994-3597797
Prupe.5G174300 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 P. persica v2.1 2955   Pp05: 14851233-14854187
Manes.14G066300 (1 of 2) PTHR21321 - PNAS-3 RELATED M. esculenta v6.1 2054   Chromosome14: 5409094-5411147

59 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30147.m013956 R. communis v0.1 122789639 PNAS-3 related 1 5272 Eudicot
orange1.1g026458m C. sinensis v1.1 122789639 PNAS-3 related 1 5272 Eudicot
Lus10000238 L. usitatissimum v1.0 122789639 PNAS-3 related 3 5272 Eudicot
Araha.8819s0023.1.p A. halleri v1.1 122789639 PNAS-3 related 2 5272 Eudicot
Cagra.3304s0001.1.p C. grandiflora v1.1 122789639 PNAS-3 related 2 5272 Eudicot
Migut.I00016.1.p M. guttatus v2.0 122789639 PNAS-3 related 1 5272 Eudicot
Glyma.19G045000.1.p G. max Wm82.a2.v1 122789639 PNAS-3 related 3 5272 Eudicot
Glyma.01G053700.1.p G. max Wm82.a2.v1 122789639 PNAS-3 related 3 5272 Eudicot
Brara.H01321.1.p B. rapa FPsc v1.3 122789639 PNAS-3 related 1 5272 Eudicot
Medtr5g043110.1 M. truncatula Mt4.0v1 122789639 PNAS-3 related 2 5272 Eudicot
Eucgr.B00371.1.p E. grandis v2.0 122789639 PNAS-3 related 1 5272 Eudicot
Prupe.5G174300.1.p P. persica v2.1 122789639 PNAS-3 related 1 5272 Eudicot
Kalax.0056s0049.1.p K. laxiflora v1.1 122789639 PNAS-3 related 2 5272 Eudicot
Kalax.0196s0065.1.p K. laxiflora v1.1 122789639 PNAS-3 related 2 5272 Eudicot
Aqcoe3G121800.1.p A. coerulea v3.1 122789639 PNAS-3 related 1 5272 Eudicot
Kaladp0674s0080.1.p K. fedtschenkoi v1.1 122789639 PNAS-3 related 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA15465 T. pratense v2 122789639 PNAS-3 related 2 5272 Eudicot
DCAR_016485 D. carota v2.0 122789639 PNAS-3 related 1 5272 Eudicot
Solyc06g071460.2.1 S. lycopersicum ITAG2.4 122789639 PNAS-3 related 1 5272 Eudicot
AUR62030968-RA C. quinoa v1.0 122789639 PNAS-3 related 2 5272 Eudicot
Phvul.002G091200.1.p P. vulgaris v2.1 122789639 PNAS-3 related 2 5272 Eudicot
Potri.012G080300.2.p P. trichocarpa v3.1 122789639 PNAS-3 related 1 5272 Eudicot
VIT_217s0000g08490.2 V. vinifera v2.1 122789639 PNAS-3 related 1 5272 Eudicot
Cucsa.196930.1 C. sativus v1.0 122789639 PNAS-3 related 1 5272 Eudicot
AT2G25355.1 A. thaliana TAIR10 122789639 PNAS-3 related 2 5272 Eudicot
AT4G32175.1 A. thaliana TAIR10 122789639 PNAS-3 related 2 5272 Eudicot
Thhalv10026115m E. salsugineum v1.0 122789639 PNAS-3 related 1 5272 Eudicot
Ciclev10021986m C. clementina v1.0 122789639 PNAS-3 related 1 5272 Eudicot
Lus10002375 L. usitatissimum v1.0 122789639 PNAS-3 related 3 5272 Eudicot
Lus10042121 L. usitatissimum v1.0 122789639 PNAS-3 related 3 5272 Eudicot