189 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Cucsa.011940 | (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | C. sativus v1.0 |
1308
 |
scaffold00154: 1336224-1337531 | |
| Cucsa.078320 | (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | C. sativus v1.0 |
3754
|
scaffold00793: 635975-639728 | |
| Cucsa.149360 | (1 of 21) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON | C. sativus v1.0 |
3952
|
scaffold01110: 195445-199396 | |
| Cucsa.007370 | (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | C. sativus v1.0 |
652
|
scaffold00089: 294877-295528 | |
| Cucsa.214260 | (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | C. sativus v1.0 |
826
|
scaffold01560: 100-925 | |
| Cucsa.300520 | (1 of 1) PF07727//PF13976//PF14227 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) | C. sativus v1.0 |
4018
|
scaffold02931: 25938-29955 | |
| ATMG00810 | (1 of 2) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | A. thaliana TAIR10 |
723
|
ChrM: 227709-228431 | |
| Lus10024900.g | (1 of 3) PTHR11439 - GAG-POL-RELATED RETROTRANSPOSON | L. usitatissimum v1.0 |
840
|
scaffold473: 659281-660120 | |
| Thecc1EG001064 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
7451
|
scaffold_1: 5050103-5057553 | |
| Thecc1EG003333 | (1 of 14) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
5424
|
scaffold_1: 22004585-22010008 | |
| Thecc1EG003232 | (1 of 58) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
845
|
scaffold_1: 20950021-20950865 | |
| Thecc1EG045040 | (1 of 2) PF00665//PF07727//PF13961//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4219) (DUF4219) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
23458
|
scaffold_10r: 21939436-21962893 | |
| Thecc1EG011209 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
6863
|
scaffold_2: 38723206-38730068 | |
| Thecc1EG017142 | (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | T. cacao v1.1 |
806
|
scaffold_4: 2035516-2036321 | |
| Thecc1EG019203 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
866
|
scaffold_4: 20965851-20966716 | |
| Thecc1EG019163 | (1 of 58) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
8139
|
scaffold_4: 20616526-20624664 | |
| Thecc1EG019887 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
3483
|
scaffold_4: 25533054-25536536 | |
| Thecc1EG022223 | (1 of 10) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) | T. cacao v1.1 |
3926
|
scaffold_5: 3223186-3227111 | |
| Thecc1EG022381 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
5046
|
scaffold_5: 4217320-4222365 | |
| Thecc1EG024325 | (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | T. cacao v1.1 |
4244
|
scaffold_5: 24543511-24547754 | |
| Thecc1EG024769 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
1655
|
scaffold_5: 28430864-28432518 | |
| Thecc1EG026511 | (1 of 3) PF00665//PF07727//PF13961//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4219) (DUF4219) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
4996
|
scaffold_5: 38758101-38763096 | |
| Thecc1EG031690 | (1 of 6) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) | T. cacao v1.1 |
2779
|
scaffold_7: 6272655-6275433 | |
| Thecc1EG032053 | (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | T. cacao v1.1 |
1498
|
scaffold_7: 8629033-8630530 | |
| Thecc1EG033756 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
1791
|
scaffold_8: 55071-56861 | |
| Thecc1EG035103 | (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | T. cacao v1.1 |
3877
|
scaffold_8: 6501568-6505444 | |
| Thecc1EG036284 | (1 of 6) PF07727//PF14244 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
5853
|
scaffold_8: 17922308-17928160 | |
| Thecc1EG038935 | (1 of 689) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | T. cacao v1.1 |
2207
|
scaffold_9: 14127221-14129427 | |
| Thecc1EG040572 | (1 of 2) PF07727//PF13961//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
7189
|
scaffold_9: 31645302-31652490 | |
| Thecc1EG040529 | (1 of 3) PF00665//PF07727//PF13961//PF13976//PF14227 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4219) (DUF4219) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
15371
|
scaffold_9: 31123435-31138805 |
189 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Cucsa.007370.1 | C. sativus v1.0 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Cucsa.011940.1 | C. sativus v1.0 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Cucsa.214260.1 | C. sativus v1.0 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Cucsa.300520.1 | C. sativus v1.0 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Lus10024900 | L. usitatissimum v1.0 | 123753008 | DNA/RNA polymerases superfamily protein | 1 | 5271 | Pentapetalae |
| Thecc1EG024325t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG022223t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG040853t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG003333t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG032053t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG019887t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG019163t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG033756t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Thecc1EG035103t1 | T. cacao v1.1 | 123753008 | DNA/RNA polymerases superfamily protein | 23 | 5271 | Pentapetalae |
| Medtr3g452820.1 | M. truncatula Mt4.0v1 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Medtr2g014690.1 | M. truncatula Mt4.0v1 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Medtr2g075320.1 | M. truncatula Mt4.0v1 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| Medtr4g079363.1 | M. truncatula Mt4.0v1 | 123753008 | DNA/RNA polymerases superfamily protein | 6 | 5271 | Pentapetalae |
| AL3G41360.t1 | A. lyrata v2.1 | 123753008 | DNA/RNA polymerases superfamily protein | 1 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA40713 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA151 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA7962 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA32101 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA9263 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA234 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA28933 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA41936 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA17863 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA40985 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
| Tp57577_TGAC_v2_mRNA29498 | T. pratense v2 | 123753008 | DNA/RNA polymerases superfamily protein | 33 | 5271 | Pentapetalae |
