Protein Family : PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 124062704

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  28

28 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g033984m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1157   scaffold06838: 1522-2678
Ciclev10029787m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 785   scaffold_8: 23136753-23137537
Gorai.002G138600 (1 of 310) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. raimondii v2.1 2238   Chr02: 23552593-23554830
Thecc1EG041891 (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) T. cacao v1.1 2416   scaffold_9: 39980303-39982718
Araha.2561s0002 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. halleri v1.1 1120   Scaffold2561: 3378-4497
Cagra.1317s0028 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 995   Scaffold1317: 106565-107559
Glyma.12G065000 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 2654   Chr12: 4789541-4792194
Brara.C01066 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 462   A03: 5023470-5023931
Bostr.26833s0248 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. stricta v1.2 945   Scaffold26833: 1293965-1294909
Medtr4g063560 (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. truncatula Mt4.0v1 1206   chr4: 23466507-23467712
SapurV1A.0008s1010 (1 of 323) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) S. purpurea v1.0 1280   chr16: 12819858-12821137
Eucgr.J02065 (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. grandis v2.0 2719   Chr10: 25855112-25857830
Eucgr.L03666 (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. grandis v2.0 1296   scaffold_4403: 99-1394
Prupe.6G082400 (1 of 201) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. persica v2.1 1039   Pp06: 5555890-5556928
Manes.11G133500 (1 of 258) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. esculenta v6.1 2976   Chromosome11: 24495621-24498596
AL215U10040 (1 of 260) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. lyrata v2.1 1415   scaffold_215: 4567-5981
Tp57577_TGAC_v2_gene10211 (1 of 231) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) T. pratense v2 1728   Tp57577_TGAC_v2_LG7: 24468449-24470176
Phvul.011G066300 (1 of 252) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. vulgaris v2.1 2301   Chr11: 5929777-5932077
Potri.001G236300 (1 of 305) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. trichocarpa v3.1 2505   Chr01: 24790129-24792633
Podel.T198500 (1 of 331) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. deltoides WV94 v2.1 1442   scaffold_54: 114844-116285
Podel.01G246900 (1 of 331) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. deltoides WV94 v2.1 2650   Chr01: 25570392-25573041
VIT_205s0094g00380 (1 of 202) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) V. vinifera v2.1 2027   chr5: 23693567-23695593
Carub.0008s2059 (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. rubella v1.1 832   scaffold_8: 10360003-10360834
MD03G1098300 (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) M. domestica v1.1 3100   Chr03: 8427204-8430303
MD11G1144700 (1 of 335) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. domestica v1.1 2804   Chr11: 13421051-13423854
Ca_16701 (1 of 208) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. arietinum v1.0 1164   Ca6: 26721663-26722826
gene14171-v1.0-hybrid (1 of 218) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) F. vesca v2.0.a2 1005   Fvb3: 24421705-24422709
gene14170-v1.0-hybrid (1 of 218) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) F. vesca v2.0.a2 3630   Fvb3: 24417450-24421079

28 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g033984m C. sinensis v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Ciclev10029787m C. clementina v1.0 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Araha.2561s0002.1.p A. halleri v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Glyma.12G065000.1.p G. max Wm82.a2.v1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Brara.C01066.1.p B. rapa FPsc v1.3 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Medtr4g063560.1 M. truncatula Mt4.0v1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Eucgr.J02065.1.p E. grandis v2.0 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
Eucgr.L03666.1.p E. grandis v2.0 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
Prupe.6G082400.1.p P. persica v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Manes.11G133500.1.p M. esculenta v6.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
AL215U10040.t1 A. lyrata v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
MD03G1098300 M. domestica v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
Gorai.002G138600.1 G. raimondii v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Thecc1EG041891t1 T. cacao v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Cagra.1317s0028.1.p C. grandiflora v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Bostr.26833s0248.1.p B. stricta v1.2 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
SapurV1A.0008s1010.1.p S. purpurea v1.0 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Tp57577_TGAC_v2_mRNA10552 T. pratense v2 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Phvul.011G066300.1.p P. vulgaris v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Potri.001G236300.1.p P. trichocarpa v3.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Podel.T198500.1.p P. deltoides WV94 v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
Podel.01G246900.1.p P. deltoides WV94 v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
VIT_205s0094g00380.3 V. vinifera v2.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
Carub.0008s2059.1.p C. rubella v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
MD11G1144700 M. domestica v1.1 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
Ca_16701 C. arietinum v1.0 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 1 5270 Rosid
gene14171-v1.0-hybrid.t1 F. vesca v2.0.a2 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid
gene14170-v1.0-hybrid.t3 F. vesca v2.0.a2 124062704 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 2 5270 Rosid