Protein Family : PNAS-3 related 124252694

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  27

27 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000227 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) R. communis v0.1 4176   30147: 3624497-3628672
orange1.1g026458m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. sinensis v1.1 3736   scaffold00020: 1108951-1112686
AT4G32175 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. thaliana TAIR10 2130   Chr4: 15535473-15537602
AT2G25355 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. thaliana TAIR10 2445   Chr2: 10801278-10803722
Thhalv10026115m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 E. salsugineum v1.0 2108   scaffold_1: 3331005-3333112
Ciclev10021986m.g (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. clementina v1.0 3849   scaffold_3: 3032787-3036635
Lus10042121.g (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 L. usitatissimum v1.0 2124   scaffold123: 795611-797734
Lus10002375.g (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 L. usitatissimum v1.0 2152   scaffold2788: 65869-68020
Lus10000238.g (1 of 4) PTHR21321 - PNAS-3 RELATED L. usitatissimum v1.0 1347   C8380905: 2467-3813
Gorai.005G137000 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 G. raimondii v2.1 3573   Chr05: 35429403-35432975
Thecc1EG012055 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) T. cacao v1.1 5450   scaffold_3: 662141-667590
Araha.8415s0002 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 A. halleri v1.1 2368   Scaffold8415: 3434-5801
Araha.8819s0023 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 A. halleri v1.1 2060   Scaffold8819: 74968-77027
Cagra.2471s0008 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. grandiflora v1.1 1791   Scaffold2471: 22361-24151
Cagra.3304s0001 (1 of 2) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 C. grandiflora v1.1 2314   Scaffold3304: 4290-6603
Brara.H01321 (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 B. rapa FPsc v1.3 1966   A08: 14372794-14374759
Bostr.7867s1072 (1 of 3) PTHR21321 - PNAS-3 RELATED B. stricta v1.2 2698   Scaffold7867: 5442543-5445240
Bostr.26326s0122 (1 of 3) PTHR21321 - PNAS-3 RELATED B. stricta v1.2 2390   Scaffold26326: 1470026-1472415
SapurV1A.0165s0010 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) S. purpurea v1.0 9159   chr12: 7214000-7223158
SapurV1A.1404s0010 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) S. purpurea v1.0 9158   chr12: 7345606-7354763
Manes.14G066300 (1 of 2) PTHR21321 - PNAS-3 RELATED M. esculenta v6.1 2054   Chromosome14: 5409094-5411147
AL4G16790 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. lyrata v2.1 2391   scaffold_4: 4228863-4231253
AL7G19680 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) A. lyrata v2.1 2140   scaffold_7: 3981469-3983608
Potri.012G080300 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) P. trichocarpa v3.1 5312   Chr12: 10657421-10662732
Podel.12G083300 (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) P. deltoides WV94 v2.1 4516   Chr12: 9897567-9902082
Carub.0004s0503 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) C. rubella v1.1 2274   scaffold_4: 2341485-2343758
Carub.0007s0838 (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) C. rubella v1.1 2184   scaffold_7: 3194821-3197004

27 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30147.m013956 R. communis v0.1 124252694 PNAS-3 related 1 5268 Malvidae
orange1.1g026458m C. sinensis v1.1 124252694 PNAS-3 related 1 5268 Malvidae
Lus10000238 L. usitatissimum v1.0 124252694 PNAS-3 related 3 5268 Malvidae
Araha.8415s0002.1.p A. halleri v1.1 124252694 PNAS-3 related 2 5268 Malvidae
Araha.8819s0023.1.p A. halleri v1.1 124252694 PNAS-3 related 2 5268 Malvidae
Cagra.3304s0001.1.p C. grandiflora v1.1 124252694 PNAS-3 related 2 5268 Malvidae
Brara.H01321.1.p B. rapa FPsc v1.3 124252694 PNAS-3 related 1 5268 Malvidae
Potri.012G080300.2.p P. trichocarpa v3.1 124252694 PNAS-3 related 1 5268 Malvidae
AT2G25355.1 A. thaliana TAIR10 124252694 PNAS-3 related 2 5268 Malvidae
AT4G32175.1 A. thaliana TAIR10 124252694 PNAS-3 related 2 5268 Malvidae
Thhalv10026115m E. salsugineum v1.0 124252694 PNAS-3 related 1 5268 Malvidae
Ciclev10021986m C. clementina v1.0 124252694 PNAS-3 related 1 5268 Malvidae
Lus10042121 L. usitatissimum v1.0 124252694 PNAS-3 related 3 5268 Malvidae
Lus10002375 L. usitatissimum v1.0 124252694 PNAS-3 related 3 5268 Malvidae
Gorai.005G137000.1 G. raimondii v2.1 124252694 PNAS-3 related 1 5268 Malvidae
Thecc1EG012055t1 T. cacao v1.1 124252694 PNAS-3 related 1 5268 Malvidae
Cagra.2471s0008.1.p C. grandiflora v1.1 124252694 PNAS-3 related 2 5268 Malvidae
Bostr.7867s1072.1.p B. stricta v1.2 124252694 PNAS-3 related 2 5268 Malvidae
Bostr.26326s0122.1.p B. stricta v1.2 124252694 PNAS-3 related 2 5268 Malvidae
SapurV1A.1404s0010.1.p S. purpurea v1.0 124252694 PNAS-3 related 2 5268 Malvidae
SapurV1A.0165s0010.1.p S. purpurea v1.0 124252694 PNAS-3 related 2 5268 Malvidae
Manes.14G066300.1.p M. esculenta v6.1 124252694 PNAS-3 related 1 5268 Malvidae
AL7G19680.t1 A. lyrata v2.1 124252694 PNAS-3 related 2 5268 Malvidae
AL4G16790.t1 A. lyrata v2.1 124252694 PNAS-3 related 2 5268 Malvidae
Podel.12G083300.1.p P. deltoides WV94 v2.1 124252694 PNAS-3 related 1 5268 Malvidae
Carub.0004s0503.1.p C. rubella v1.1 124252694 PNAS-3 related 2 5268 Malvidae
Carub.0007s0838.1.p C. rubella v1.1 124252694 PNAS-3 related 2 5268 Malvidae