Protein Family : auxin transport protein (BIG) 124243657

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  17

17 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29790.t000034 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) R. communis v0.1 16766   29790: 306098-322863
AT3G02260 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) A. thaliana TAIR10 BIG 17506   Chr3: 430984-448489
Thhalv10019869m.g (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 E. salsugineum v1.0 17566   scaffold_13: 9001732-9019297
Ciclev10010885m.g (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 C. clementina v1.0 22952   scaffold_6: 23916876-23939827
Lus10034360.g (1 of 2) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 L. usitatissimum v1.0 23136   scaffold310: 865885-889020
Gorai.001G206500 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 G. raimondii v2.1 20312   Chr01: 40473052-40493363
Thecc1EG019010 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) T. cacao v1.1 35697   scaffold_4: 19566776-19602472
Araha.2210s0020 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 A. halleri v1.1 17671   Scaffold2210: 74260-91930
Cagra.3823s0026 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 C. grandiflora v1.1 17541   Scaffold3823: 84656-102196
Brara.E03586 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 B. rapa FPsc v1.3 17308   A05: 28070088-28087395
Bostr.1460s0142 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 B. stricta v1.2 18075   Scaffold1460: 584486-602560
SapurV1A.0645s0160 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) S. purpurea v1.0 18248   chr17: 13697888-13716135
Manes.02G059900 (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 M. esculenta v6.1 20904   Chromosome02: 4435195-4456098
AL3G11530 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) A. lyrata v2.1 17645   scaffold_3: 525496-543140
Potri.017G101100 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) P. trichocarpa v3.1 23517   Chr17: 11802769-11826285
Podel.17G103600 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) P. deltoides WV94 v2.1 23705   Chr17: 11400333-11424037
Carub.0003s0138 (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) C. rubella v1.1 16139   scaffold_3: 448249-464387

17 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29790.m000839 R. communis v0.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Thhalv10019869m E. salsugineum v1.0 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Ciclev10010885m C. clementina v1.0 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Lus10034360 L. usitatissimum v1.0 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Araha.2210s0020.1.p A. halleri v1.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Cagra.3823s0026.1.p C. grandiflora v1.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Brara.E03586.1.p B. rapa FPsc v1.3 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Bostr.1460s0142.1.p B. stricta v1.2 124243657 auxin transport protein (BIG) 1 5268 Malvidae
AL3G11530.t1 A. lyrata v2.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Potri.017G101100.2.p P. trichocarpa v3.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Podel.17G103600.1.p P. deltoides WV94 v2.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
AT3G02260.1 A. thaliana TAIR10 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Gorai.001G206500.1 G. raimondii v2.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Thecc1EG019010t2 T. cacao v1.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
SapurV1A.0645s0160.1.p S. purpurea v1.0 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Manes.02G059900.1.p M. esculenta v6.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae
Carub.0003s0138.1.p C. rubella v1.1 124243657 auxin transport protein (BIG) 1 5268 Malvidae