Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 124242816

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30094.t000010 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) R. communis v0.1 2977   30094: 110928-113904
AT3G26420 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 ATRZ-1A 4489   Chr3: 9671517-9676005
Thhalv10004793m.g (1 of 10) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) E. salsugineum v1.0 2071   scaffold_6: 6415720-6417790
Lus10020953.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1278   scaffold3: 19466-20743
Gorai.001G074700 (1 of 1) KOG0121//KOG4207 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4423   Chr01: 7640275-7644697
Gorai.008G193200 (1 of 10) KOG4207 - Predicted splicing factor, SR protein superfamily G. raimondii v2.1 4623   Chr08: 47725215-47729837
Thecc1EG014006 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) T. cacao v1.1 3469   scaffold_3: 19183328-19186796
Araha.29736s0001 (1 of 4) KOG4207 - Predicted splicing factor, SR protein superfamily A. halleri v1.1 2778   Scaffold29736: 248-3025
Cagra.3514s0003 (1 of 8) KOG4207 - Predicted splicing factor, SR protein superfamily C. grandiflora v1.1 2572   Scaffold3514: 9450-12021
Brara.F03273 (1 of 9) KOG4207 - Predicted splicing factor, SR protein superfamily B. rapa FPsc v1.3 2633   A06: 25653765-25656397
Brara.B03236 (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) B. rapa FPsc v1.3 1578   A02: 27175104-27176681
Bostr.0556s0314 (1 of 1) KOG0126//KOG4207 - Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily B. stricta v1.2 2663   Scaffold556: 1886693-1889355
SapurV1A.0869s0190 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) S. purpurea v1.0 1153   chr01: 17205603-17206755
Manes.11G107800 (1 of 9) KOG4207 - Predicted splicing factor, SR protein superfamily M. esculenta v6.1 10909   Chromosome11: 19981163-19992071
AL5G15190 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. lyrata v2.1 2485   scaffold_5: 2816524-2819008
Potri.001G207100 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) P. trichocarpa v3.1 1461   Chr01: 20750806-20752266
Podel.01G217700 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) P. deltoides WV94 v2.1 1457   Chr01: 21612464-21613920
Carub.0005s0439 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) C. rubella v1.1 2490   scaffold_5: 1752702-1755191

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30094.m000674 R. communis v0.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Gorai.001G074700.1 G. raimondii v2.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5268 Malvidae
Thecc1EG014006t2 T. cacao v1.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Araha.29736s0001.1.p A. halleri v1.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Brara.B03236.1.p B. rapa FPsc v1.3 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5268 Malvidae
Bostr.0556s0314.1.p B. stricta v1.2 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Potri.001G207100.1.p P. trichocarpa v3.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Carub.0005s0439.1.p C. rubella v1.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
AT3G26420.1 A. thaliana TAIR10 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Thhalv10004793m E. salsugineum v1.0 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Lus10020953 L. usitatissimum v1.0 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Gorai.008G193200.1 G. raimondii v2.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5268 Malvidae
Cagra.3514s0003.1.p C. grandiflora v1.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Brara.F03273.1.p B. rapa FPsc v1.3 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5268 Malvidae
SapurV1A.0869s0190.1.p S. purpurea v1.0 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Manes.11G107800.1.p M. esculenta v6.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
AL5G15190.t1 A. lyrata v2.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae
Podel.01G217700.1.p P. deltoides WV94 v2.1 124242816 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5268 Malvidae