Protein Family : transporter associated with antigen processing protein 1 124236991

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27504.t000035 (1 of 1) PF00664//PF13304 - ABC transporter transmembrane region (ABC_membrane) // AAA domain, putative AbiEii toxin, Type IV TA system (AAA_21) R. communis v0.1 6060   27504: 248225-254284
orange1.1g005203m.g (1 of 40) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) C. sinensis v1.1 6694   scaffold00003: 1485290-1491983
AT1G70610 (1 of 1) PTHR24222//PTHR24222:SF22 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC A. thaliana TAIR10 4543   Chr1: 26621961-26626503
Thhalv10018207m.g (1 of 1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC E. salsugineum v1.0 4643   scaffold_9: 4362230-4366872
Ciclev10030794m.g (1 of 38) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) C. clementina v1.0 7868   scaffold_4: 22340260-22348127
Lus10006209.g (1 of 62) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) L. usitatissimum v1.0 4691   scaffold1140: 64554-69244
Lus10036857.g (1 of 62) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) L. usitatissimum v1.0 4693   scaffold31: 977601-982293
Gorai.002G186500 (1 of 58) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) G. raimondii v2.1 8476   Chr02: 49741429-49749904
Thecc1EG010512 (1 of 1) K05656 - ATP-binding cassette, subfamily B (MDR/TAP), member 9 (ABCB9, TAPL) T. cacao v1.1 6839   scaffold_2: 33989545-33996383
Cagra.1777s0009 (1 of 1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC C. grandiflora v1.1 4522   Scaffold1777: 41127-45648
Brara.G02436 (1 of 1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC B. rapa FPsc v1.3 4343   A07: 20428327-20432669
Bostr.10273s0294 (1 of 1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC B. stricta v1.2 4584   Scaffold10273: 1650844-1655427
SapurV1A.0317s0290 (1 of 12) 3.6.3.43 - Peptide-transporting ATPase S. purpurea v1.0 7638   chr10: 2004048-2011685
Manes.13G024700 (1 of 45) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) M. esculenta v6.1 7167   Chromosome13: 2321685-2328851
AL2G30040 (1 of 1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC A. lyrata v2.1 4535   scaffold_2: 14526067-14530601
Potri.010G045900 (1 of 2) PF00664//PF13304 - ABC transporter transmembrane region (ABC_membrane) // AAA domain, putative AbiEii toxin, Type IV TA system (AAA_21) P. trichocarpa v3.1 8135   Chr10: 7663207-7671341
Podel.10G039500 (1 of 16) 3.6.3.43 - Peptide-transporting ATPase P. deltoides WV94 v2.1 8005   Chr10: 6357802-6365806
Carub.0002s1734 (1 of 1) K05656 - ATP-binding cassette, subfamily B (MDR/TAP), member 9 (ABCB9, TAPL) C. rubella v1.1 4579   scaffold_2: 10089035-10093613

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27504.m000643 R. communis v0.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
orange1.1g005203m C. sinensis v1.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
AT1G70610.1 A. thaliana TAIR10 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Thhalv10018207m E. salsugineum v1.0 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Ciclev10030794m C. clementina v1.0 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Lus10006209 L. usitatissimum v1.0 124236991 transporter associated with antigen processing protein 1 2 5268 Malvidae
Lus10036857 L. usitatissimum v1.0 124236991 transporter associated with antigen processing protein 1 2 5268 Malvidae
Gorai.002G186500.1 G. raimondii v2.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Thecc1EG010512t1 T. cacao v1.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Cagra.1777s0009.1.p C. grandiflora v1.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Brara.G02436.1.p B. rapa FPsc v1.3 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Bostr.10273s0294.1.p B. stricta v1.2 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
SapurV1A.0317s0290.1.p S. purpurea v1.0 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Manes.13G024700.1.p M. esculenta v6.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
AL2G30040.t1 A. lyrata v2.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Potri.010G045900.2.p P. trichocarpa v3.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Podel.10G039500.1.p P. deltoides WV94 v2.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae
Carub.0002s1734.1.p C. rubella v1.1 124236991 transporter associated with antigen processing protein 1 1 5268 Malvidae