41 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| 30190.t000316 | (1 of 3) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | R. communis v0.1 |
306
 |
30190: 1718175-1718480 | |
| orange1.1g039492m.g | (1 of 3) PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON | C. sinensis v1.1 |
615
|
scaffold02419: 12732-13346 | |
| AT1G48720 | (1 of 1) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | A. thaliana TAIR10 |
294
|
Chr1: 18018148-18018441 | |
| Thhalv10028209m.g | (1 of 2) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | E. salsugineum v1.0 |
516
|
scaffold_14: 8556237-8556752 | |
| Thhalv10027963m.g | (1 of 6) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | E. salsugineum v1.0 |
570
|
scaffold_14: 8543383-8543952 | |
| Thhalv10001863m.g | E. salsugineum v1.0 |
255
|
scaffold_23: 293682-293936 | ||
| Ciclev10003947m.g | (1 of 1) PTHR11439//PTHR11439:SF173 - GAG-POL-RELATED RETROTRANSPOSON | C. clementina v1.0 |
506
|
scaffold_5: 20329517-20330022 | |
| Ciclev10030169m.g | (1 of 2) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | C. clementina v1.0 |
555
|
scaffold_8: 9018335-9018889 | |
| Ciclev10027035m.g | (1 of 4) PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON | C. clementina v1.0 |
888
|
scaffold_7: 9285083-9285970 | |
| Ciclev10003497m.g | (1 of 8) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | C. clementina v1.0 |
420
|
scaffold_5: 17291954-17292373 | |
| Gorai.012G035900 | (1 of 5) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | G. raimondii v2.1 |
514
|
Chr12: 4442814-4443327 | |
| Gorai.013G068100 | (1 of 6) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | G. raimondii v2.1 |
467
|
Chr13: 7860344-7860810 | |
| Gorai.N009900 | (1 of 5) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | G. raimondii v2.1 |
1025
|
scaffold_23: 27677-28701 | |
| Gorai.005G117400 | (1 of 6) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | G. raimondii v2.1 |
1031
|
Chr05: 23451036-23452066 | |
| Thecc1EG044162 | (1 of 58) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
9933
|
scaffold_10r: 14165022-14174954 | |
| Thecc1EG045223 | (1 of 47) PF13961 - Domain of unknown function (DUF4219) (DUF4219) | T. cacao v1.1 |
806
|
scaffold_10r: 23201845-23202650 | |
| Thecc1EG045794 | (1 of 3) PF13961//PF14227 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
1940
|
scaffold_12: 34816-36755 | |
| Thecc1EG007590 | (1 of 3) PF13961//PF14227 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
1847
|
scaffold_2: 7801639-7803485 | |
| Thecc1EG012799 | (1 of 1) PF00665//PF13976//PF14227 - Integrase core domain (rve) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
2239
|
scaffold_3: 6140791-6143029 | |
| Thecc1EG018982 | (1 of 9) PF13961//PF14227 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
2397
|
scaffold_4: 19368433-19370829 | |
| Thecc1EG019094 | (1 of 9) PF13961//PF14227 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
974
|
scaffold_4: 20168436-20169409 | |
| Thecc1EG022224 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
1880
|
scaffold_5: 3227468-3229347 | |
| Thecc1EG025683 | (1 of 1) PF05042//PF14227 - Caleosin related protein (Caleosin) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
1668
|
scaffold_5: 34087214-34088881 | |
| Thecc1EG026102 | (1 of 58) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
4278
|
scaffold_5: 36535834-36540111 | |
| Thecc1EG030041 | (1 of 58) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
1091
|
scaffold_6: 25527165-25528255 | |
| Thecc1EG031100 | (1 of 6) PF13961//PF14223 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
1623
|
scaffold_7: 2915870-2917492 | |
| Thecc1EG031541 | (1 of 4) PF13961//PF14223 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2) | T. cacao v1.1 |
1427
|
scaffold_7: 5462715-5464141 | |
| Thecc1EG031836 | (1 of 3) PF13961//PF14227 - Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
1427
|
scaffold_7: 7346798-7348224 | |
| Thecc1EG036421 | (1 of 49) PF14227 - gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
4948
|
scaffold_8: 18898680-18903627 | |
| Thecc1EG038934 | (1 of 49) PF14227 - gag-polypeptide of LTR copia-type (UBN2_2) | T. cacao v1.1 |
1642
|
scaffold_9: 14124341-14125982 |
41 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| 30190.m011080 | R. communis v0.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 1 | 5268 | Malvidae |
| Thhalv10028209m | E. salsugineum v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 3 | 5268 | Malvidae |
| Ciclev10003497m | C. clementina v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Ciclev10030169m | C. clementina v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Gorai.013G068100.1 | G. raimondii v2.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Gorai.012G035900.1 | G. raimondii v2.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Thecc1EG044162t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG031100t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG018982t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Bostr.10064s0076.1.p | B. stricta v1.2 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 2 | 5268 | Malvidae |
| Bostr.25463s0310.1.p | B. stricta v1.2 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 2 | 5268 | Malvidae |
| SapurV1A.0080s0440.1.p | S. purpurea v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 2 | 5268 | Malvidae |
| Manes.S106000.1.p | M. esculenta v6.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 3 | 5268 | Malvidae |
| Potri.009G166500.1.p | P. trichocarpa v3.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 1 | 5268 | Malvidae |
| orange1.1g039492m | C. sinensis v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 1 | 5268 | Malvidae |
| AT1G48720.1 | A. thaliana TAIR10 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 1 | 5268 | Malvidae |
| Thhalv10001863m | E. salsugineum v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 3 | 5268 | Malvidae |
| Thhalv10027963m | E. salsugineum v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 3 | 5268 | Malvidae |
| Ciclev10027035m | C. clementina v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Ciclev10003947m | C. clementina v1.0 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Gorai.005G117400.1 | G. raimondii v2.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Gorai.N009900.1 | G. raimondii v2.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 4 | 5268 | Malvidae |
| Thecc1EG031541t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG038934t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG025683t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG012799t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG045794t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG007590t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG026102t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
| Thecc1EG036421t1 | T. cacao v1.1 | 124253923 | PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | 16 | 5268 | Malvidae |
