Protein Family : E3 ubiquitin ligase involved in syntaxin degradation 122181562

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  11

11 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.7G119700 (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED S. italica v2.2 9761   scaffold_7: 21644317-21654077
Zm00008a038020 (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Z. mays PH207 v1.1 12085   chr10: 120074235-120086319
Pavir.7KG182900 (1 of 3) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED P. virgatum v4.1 9491   Chr07K: 48684737-48694227
Pavir.7NG182700 (1 of 3) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED P. virgatum v4.1 8811   Chr07N: 46823119-46831929
Sobic.006G094201 (1 of 3) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED S. bicolor v3.1.1 11521   Chr06: 46396366-46407886
Sobic.006G101800 (1 of 3) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED S. bicolor v3.1.1 9010   Chr06: 47217182-47226191
Zm00001d025575 (1 of 1) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Z. mays RefGen_V4 11614   10: 122821714-122833327
Pahal.7G173000 (1 of 1) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED P. hallii v3.1 9094   Chr07: 36663812-36672905
PhHAL.7G164200 (1 of 1) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED P. hallii HAL v2.1 9024   Chr07: 32631892-32640915
Misin04G048800 (1 of 6) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED M. sinensis v7.1 10266   Chr04: 11128409-11138674
Sevir.7G128000 (1 of 1) PTHR23160//PTHR23160:SF3 - MYOSIN HEAVY CHAIN-RELATED // SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED S. viridis v2.1 10002   Chr_07: 20716936-20726937

11 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.7G119700.1.p S. italica v2.2 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pavir.7NG182700.1.p P. virgatum v4.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Pavir.7KG182900.1.p P. virgatum v4.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Sobic.006G094201.1.p S. bicolor v3.1.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Zm00001d025575_P003 Z. mays RefGen_V4 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pahal.7G173000.1.p P. hallii v3.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
PhHAL.7G164200.1.p P. hallii HAL v2.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Misin04G048800.1.p M. sinensis v7.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Sevir.7G128000.1.p S. viridis v2.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00008a038020_P01 Z. mays PH207 v1.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Sobic.006G101800.1.p S. bicolor v3.1.1 122181562 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae