Gene : Carub.0004s0440 C. rubella v1.1
Defline:  (1 of 4) PTHR33228//PTHR33228:SF5 - FAMILY NOT NAMED // PROTEIN GLUTAMINE DUMPER 1-RELATED Genomic Order:  440
Name:  ? Carub.0004s0440 Secondary Identifier:  ? PAC:39236433
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0440 0.5kb upstream 0.5kb upstream 1241 true scaffold_4: 2018212-2019452 Capsella rubella
Carub.0004s0440 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2018212-2018711 Capsella rubella
Carub.0004s0440 0.5kb downstream 0.5kb downstream 1241 true scaffold_4: 2018712-2019952 Capsella rubella
Carub.0004s0440 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2019453-2019952 Capsella rubella
Carub.0004s0440 1.0kb upstream 1.0kb upstream 1741 true scaffold_4: 2017712-2019452 Capsella rubella
Carub.0004s0440 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2017712-2018711 Capsella rubella
Carub.0004s0440 1.0kb downstream 1.0kb downstream 1741 true scaffold_4: 2018712-2020452 Capsella rubella
Carub.0004s0440 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2019453-2020452 Capsella rubella
Carub.0004s0440 2.0kb upstream 2.0kb upstream 2741 true scaffold_4: 2016712-2019452 Capsella rubella
Carub.0004s0440 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2016712-2018711 Capsella rubella
Carub.0004s0440 2.0kb downstream 2.0kb downstream 2741 true scaffold_4: 2018712-2021452 Capsella rubella
Carub.0004s0440 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2019453-2021452 Capsella rubella
Carub.0004s0440 5.0kb upstream 5.0kb upstream 5741 true scaffold_4: 2013712-2019452 Capsella rubella
Carub.0004s0440 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2013712-2018711 Capsella rubella
Carub.0004s0440 5.0kb downstream 5.0kb downstream 5741 true scaffold_4: 2018712-2024452 Capsella rubella
Carub.0004s0440 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2019453-2024452 Capsella rubella
Carub.0004s0440 10.0kb upstream 10.0kb upstream 10741 true scaffold_4: 2008712-2019452 Capsella rubella
Carub.0004s0440 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2008712-2018711 Capsella rubella
Carub.0004s0440 10.0kb downstream 10.0kb downstream 10741 true scaffold_4: 2018712-2029452 Capsella rubella
Carub.0004s0440 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2019453-2029452 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374232 5261 Brassicaceae View MSA
123837980 5264 Brassicales-Malvales View MSA
124350031 5266 SBM View MSA
124253904 5268 Malvidae View MSA
124063553 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain