Gene : Carub.0004s0451 C. rubella v1.1
Defline:  (1 of 70) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  451
Name:  ? Carub.0004s0451 Secondary Identifier:  ? PAC:39239009
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0451 0.5kb upstream 0.5kb upstream 3285 true scaffold_4: 2060932-2064216 Capsella rubella
Carub.0004s0451 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2060932-2061431 Capsella rubella
Carub.0004s0451 0.5kb downstream 0.5kb downstream 3285 true scaffold_4: 2061432-2064716 Capsella rubella
Carub.0004s0451 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2064217-2064716 Capsella rubella
Carub.0004s0451 1.0kb upstream 1.0kb upstream 3785 true scaffold_4: 2060432-2064216 Capsella rubella
Carub.0004s0451 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2060432-2061431 Capsella rubella
Carub.0004s0451 1.0kb downstream 1.0kb downstream 3785 true scaffold_4: 2061432-2065216 Capsella rubella
Carub.0004s0451 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2064217-2065216 Capsella rubella
Carub.0004s0451 2.0kb upstream 2.0kb upstream 4785 true scaffold_4: 2059432-2064216 Capsella rubella
Carub.0004s0451 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2059432-2061431 Capsella rubella
Carub.0004s0451 2.0kb downstream 2.0kb downstream 4785 true scaffold_4: 2061432-2066216 Capsella rubella
Carub.0004s0451 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2064217-2066216 Capsella rubella
Carub.0004s0451 5.0kb upstream 5.0kb upstream 7785 true scaffold_4: 2056432-2064216 Capsella rubella
Carub.0004s0451 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2056432-2061431 Capsella rubella
Carub.0004s0451 5.0kb downstream 5.0kb downstream 7785 true scaffold_4: 2061432-2069216 Capsella rubella
Carub.0004s0451 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2064217-2069216 Capsella rubella
Carub.0004s0451 10.0kb upstream 10.0kb upstream 12785 true scaffold_4: 2051432-2064216 Capsella rubella
Carub.0004s0451 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2051432-2061431 Capsella rubella
Carub.0004s0451 10.0kb downstream 10.0kb downstream 12785 true scaffold_4: 2061432-2074216 Capsella rubella
Carub.0004s0451 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2064217-2074216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344188 5261 Brassicaceae View MSA
123784229 5264 Brassicales-Malvales View MSA
124282425 5266 SBM View MSA
124252619 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain