Gene : Carub.0004s0471 C. rubella v1.1
Defline:  (1 of 1) PTHR10050//PTHR10050:SF33 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  471
Name:  ? Carub.0004s0471 Secondary Identifier:  ? PAC:39236053
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0471 0.5kb upstream 0.5kb upstream 2564 true scaffold_4: 2162201-2164764 Capsella rubella
Carub.0004s0471 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2162201-2162700 Capsella rubella
Carub.0004s0471 0.5kb downstream 0.5kb downstream 2564 true scaffold_4: 2162701-2165264 Capsella rubella
Carub.0004s0471 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2164765-2165264 Capsella rubella
Carub.0004s0471 1.0kb upstream 1.0kb upstream 3064 true scaffold_4: 2161701-2164764 Capsella rubella
Carub.0004s0471 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2161701-2162700 Capsella rubella
Carub.0004s0471 1.0kb downstream 1.0kb downstream 3064 true scaffold_4: 2162701-2165764 Capsella rubella
Carub.0004s0471 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2164765-2165764 Capsella rubella
Carub.0004s0471 2.0kb upstream 2.0kb upstream 4064 true scaffold_4: 2160701-2164764 Capsella rubella
Carub.0004s0471 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2160701-2162700 Capsella rubella
Carub.0004s0471 2.0kb downstream 2.0kb downstream 4064 true scaffold_4: 2162701-2166764 Capsella rubella
Carub.0004s0471 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2164765-2166764 Capsella rubella
Carub.0004s0471 5.0kb upstream 5.0kb upstream 7064 true scaffold_4: 2157701-2164764 Capsella rubella
Carub.0004s0471 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2157701-2162700 Capsella rubella
Carub.0004s0471 5.0kb downstream 5.0kb downstream 7064 true scaffold_4: 2162701-2169764 Capsella rubella
Carub.0004s0471 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2164765-2169764 Capsella rubella
Carub.0004s0471 10.0kb upstream 10.0kb upstream 12064 true scaffold_4: 2152701-2164764 Capsella rubella
Carub.0004s0471 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2152701-2162700 Capsella rubella
Carub.0004s0471 10.0kb downstream 10.0kb downstream 12064 true scaffold_4: 2162701-2174764 Capsella rubella
Carub.0004s0471 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2164765-2174764 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363705 5261 Brassicaceae View MSA
123839439 5264 Brassicales-Malvales View MSA
124337695 5266 SBM View MSA
124244691 5268 Malvidae View MSA
124073869 5270 Rosid View MSA
123747000 5271 Pentapetalae View MSA
122786707 5272 Eudicot View MSA
122043043 5273 Angiosperm View MSA
121348450 5274 Embryophyte View MSA
123428555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain