Gene : Carub.0004s0479 C. rubella v1.1
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  479
Name:  ? Carub.0004s0479 Secondary Identifier:  ? PAC:39237591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0479 0.5kb upstream 0.5kb upstream 1562 true scaffold_4: 2218445-2220006 Capsella rubella
Carub.0004s0479 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2219507-2220006 Capsella rubella
Carub.0004s0479 0.5kb downstream 0.5kb downstream 1562 true scaffold_4: 2217945-2219506 Capsella rubella
Carub.0004s0479 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2217945-2218444 Capsella rubella
Carub.0004s0479 1.0kb upstream 1.0kb upstream 2062 true scaffold_4: 2218445-2220506 Capsella rubella
Carub.0004s0479 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2219507-2220506 Capsella rubella
Carub.0004s0479 1.0kb downstream 1.0kb downstream 2062 true scaffold_4: 2217445-2219506 Capsella rubella
Carub.0004s0479 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2217445-2218444 Capsella rubella
Carub.0004s0479 2.0kb upstream 2.0kb upstream 3062 true scaffold_4: 2218445-2221506 Capsella rubella
Carub.0004s0479 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2219507-2221506 Capsella rubella
Carub.0004s0479 2.0kb downstream 2.0kb downstream 3062 true scaffold_4: 2216445-2219506 Capsella rubella
Carub.0004s0479 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2216445-2218444 Capsella rubella
Carub.0004s0479 5.0kb upstream 5.0kb upstream 6062 true scaffold_4: 2218445-2224506 Capsella rubella
Carub.0004s0479 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2219507-2224506 Capsella rubella
Carub.0004s0479 5.0kb downstream 5.0kb downstream 6062 true scaffold_4: 2213445-2219506 Capsella rubella
Carub.0004s0479 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2213445-2218444 Capsella rubella
Carub.0004s0479 10.0kb upstream 10.0kb upstream 11062 true scaffold_4: 2218445-2229506 Capsella rubella
Carub.0004s0479 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2219507-2229506 Capsella rubella
Carub.0004s0479 10.0kb downstream 10.0kb downstream 11062 true scaffold_4: 2208445-2219506 Capsella rubella
Carub.0004s0479 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2208445-2218444 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122372046 5261 Brassicaceae View MSA
123800283 5264 Brassicales-Malvales View MSA
124297716 5266 SBM View MSA
124149537 5268 Malvidae View MSA
123875326 5270 Rosid View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain