Gene : Carub.0004s0314 C. rubella v1.1
Defline:  (1 of 3) PTHR10217:SF500 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 5-RELATED Genomic Order:  314
Name:  ? Carub.0004s0314 Secondary Identifier:  ? PAC:39237037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0314 0.5kb upstream 0.5kb upstream 3993 true scaffold_4: 1366932-1370924 Capsella rubella
Carub.0004s0314 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1370425-1370924 Capsella rubella
Carub.0004s0314 0.5kb downstream 0.5kb downstream 3993 true scaffold_4: 1366432-1370424 Capsella rubella
Carub.0004s0314 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1366432-1366931 Capsella rubella
Carub.0004s0314 1.0kb upstream 1.0kb upstream 4493 true scaffold_4: 1366932-1371424 Capsella rubella
Carub.0004s0314 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1370425-1371424 Capsella rubella
Carub.0004s0314 1.0kb downstream 1.0kb downstream 4493 true scaffold_4: 1365932-1370424 Capsella rubella
Carub.0004s0314 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1365932-1366931 Capsella rubella
Carub.0004s0314 2.0kb upstream 2.0kb upstream 5493 true scaffold_4: 1366932-1372424 Capsella rubella
Carub.0004s0314 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1370425-1372424 Capsella rubella
Carub.0004s0314 2.0kb downstream 2.0kb downstream 5493 true scaffold_4: 1364932-1370424 Capsella rubella
Carub.0004s0314 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1364932-1366931 Capsella rubella
Carub.0004s0314 5.0kb upstream 5.0kb upstream 8493 true scaffold_4: 1366932-1375424 Capsella rubella
Carub.0004s0314 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1370425-1375424 Capsella rubella
Carub.0004s0314 5.0kb downstream 5.0kb downstream 8493 true scaffold_4: 1361932-1370424 Capsella rubella
Carub.0004s0314 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1361932-1366931 Capsella rubella
Carub.0004s0314 10.0kb upstream 10.0kb upstream 13493 true scaffold_4: 1366932-1380424 Capsella rubella
Carub.0004s0314 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1370425-1380424 Capsella rubella
Carub.0004s0314 10.0kb downstream 10.0kb downstream 13493 true scaffold_4: 1356932-1370424 Capsella rubella
Carub.0004s0314 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1356932-1366931 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365951 5261 Brassicaceae View MSA
123838006 5264 Brassicales-Malvales View MSA
124340121 5266 SBM View MSA
124238344 5268 Malvidae View MSA
124064062 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain