Gene : Carub.0004s0313 C. rubella v1.1
Defline:  (1 of 5) PTHR11922:SF42 - CLASS I GLUTAMINE AMIDOTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  313
Name:  ? Carub.0004s0313 Secondary Identifier:  ? PAC:39236068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0313 0.5kb upstream 0.5kb upstream 1704 true scaffold_4: 1365459-1367162 Capsella rubella
Carub.0004s0313 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1365459-1365958 Capsella rubella
Carub.0004s0313 0.5kb downstream 0.5kb downstream 1704 true scaffold_4: 1365959-1367662 Capsella rubella
Carub.0004s0313 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1367163-1367662 Capsella rubella
Carub.0004s0313 1.0kb upstream 1.0kb upstream 2204 true scaffold_4: 1364959-1367162 Capsella rubella
Carub.0004s0313 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1364959-1365958 Capsella rubella
Carub.0004s0313 1.0kb downstream 1.0kb downstream 2204 true scaffold_4: 1365959-1368162 Capsella rubella
Carub.0004s0313 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1367163-1368162 Capsella rubella
Carub.0004s0313 2.0kb upstream 2.0kb upstream 3204 true scaffold_4: 1363959-1367162 Capsella rubella
Carub.0004s0313 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1363959-1365958 Capsella rubella
Carub.0004s0313 2.0kb downstream 2.0kb downstream 3204 true scaffold_4: 1365959-1369162 Capsella rubella
Carub.0004s0313 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1367163-1369162 Capsella rubella
Carub.0004s0313 5.0kb upstream 5.0kb upstream 6204 true scaffold_4: 1360959-1367162 Capsella rubella
Carub.0004s0313 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1360959-1365958 Capsella rubella
Carub.0004s0313 5.0kb downstream 5.0kb downstream 6204 true scaffold_4: 1365959-1372162 Capsella rubella
Carub.0004s0313 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1367163-1372162 Capsella rubella
Carub.0004s0313 10.0kb upstream 10.0kb upstream 11204 true scaffold_4: 1355959-1367162 Capsella rubella
Carub.0004s0313 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1355959-1365958 Capsella rubella
Carub.0004s0313 10.0kb downstream 10.0kb downstream 11204 true scaffold_4: 1365959-1377162 Capsella rubella
Carub.0004s0313 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1367163-1377162 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367584 5261 Brassicaceae View MSA
123840878 5264 Brassicales-Malvales View MSA
124345179 5266 SBM View MSA
124239576 5268 Malvidae View MSA
124070064 5270 Rosid View MSA
123742597 5271 Pentapetalae View MSA
122795576 5272 Eudicot View MSA
122050443 5273 Angiosperm View MSA
121350847 5274 Embryophyte View MSA
123426192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain