Gene : Carub.0004s0391 C. rubella v1.1
Defline:  (1 of 6) KOG4210 - Nuclear localization sequence binding protein Genomic Order:  391
Name:  ? Carub.0004s0391 Secondary Identifier:  ? PAC:39238009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0391 0.5kb upstream 0.5kb upstream 1867 true scaffold_4: 1772923-1774789 Capsella rubella
Carub.0004s0391 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1774290-1774789 Capsella rubella
Carub.0004s0391 0.5kb downstream 0.5kb downstream 1867 true scaffold_4: 1772423-1774289 Capsella rubella
Carub.0004s0391 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1772423-1772922 Capsella rubella
Carub.0004s0391 1.0kb upstream 1.0kb upstream 2367 true scaffold_4: 1772923-1775289 Capsella rubella
Carub.0004s0391 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1774290-1775289 Capsella rubella
Carub.0004s0391 1.0kb downstream 1.0kb downstream 2367 true scaffold_4: 1771923-1774289 Capsella rubella
Carub.0004s0391 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1771923-1772922 Capsella rubella
Carub.0004s0391 2.0kb upstream 2.0kb upstream 3367 true scaffold_4: 1772923-1776289 Capsella rubella
Carub.0004s0391 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1774290-1776289 Capsella rubella
Carub.0004s0391 2.0kb downstream 2.0kb downstream 3367 true scaffold_4: 1770923-1774289 Capsella rubella
Carub.0004s0391 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1770923-1772922 Capsella rubella
Carub.0004s0391 5.0kb upstream 5.0kb upstream 6367 true scaffold_4: 1772923-1779289 Capsella rubella
Carub.0004s0391 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1774290-1779289 Capsella rubella
Carub.0004s0391 5.0kb downstream 5.0kb downstream 6367 true scaffold_4: 1767923-1774289 Capsella rubella
Carub.0004s0391 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1767923-1772922 Capsella rubella
Carub.0004s0391 10.0kb upstream 10.0kb upstream 11367 true scaffold_4: 1772923-1784289 Capsella rubella
Carub.0004s0391 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1774290-1784289 Capsella rubella
Carub.0004s0391 10.0kb downstream 10.0kb downstream 11367 true scaffold_4: 1762923-1774289 Capsella rubella
Carub.0004s0391 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1762923-1772922 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374494 5261 Brassicaceae View MSA
123839784 5264 Brassicales-Malvales View MSA
124339869 5266 SBM View MSA
124240217 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain