Gene : Carub.0004s0595 C. rubella v1.1
Defline:  (1 of 5) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  595
Name:  ? Carub.0004s0595 Secondary Identifier:  ? PAC:39237216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0595 0.5kb upstream 0.5kb upstream 1953 true scaffold_4: 2950885-2952837 Capsella rubella
Carub.0004s0595 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2950885-2951384 Capsella rubella
Carub.0004s0595 0.5kb downstream 0.5kb downstream 1953 true scaffold_4: 2951385-2953337 Capsella rubella
Carub.0004s0595 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2952838-2953337 Capsella rubella
Carub.0004s0595 1.0kb upstream 1.0kb upstream 2453 true scaffold_4: 2950385-2952837 Capsella rubella
Carub.0004s0595 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2950385-2951384 Capsella rubella
Carub.0004s0595 1.0kb downstream 1.0kb downstream 2453 true scaffold_4: 2951385-2953837 Capsella rubella
Carub.0004s0595 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2952838-2953837 Capsella rubella
Carub.0004s0595 2.0kb upstream 2.0kb upstream 3453 true scaffold_4: 2949385-2952837 Capsella rubella
Carub.0004s0595 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2949385-2951384 Capsella rubella
Carub.0004s0595 2.0kb downstream 2.0kb downstream 3453 true scaffold_4: 2951385-2954837 Capsella rubella
Carub.0004s0595 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2952838-2954837 Capsella rubella
Carub.0004s0595 5.0kb upstream 5.0kb upstream 6453 true scaffold_4: 2946385-2952837 Capsella rubella
Carub.0004s0595 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2946385-2951384 Capsella rubella
Carub.0004s0595 5.0kb downstream 5.0kb downstream 6453 true scaffold_4: 2951385-2957837 Capsella rubella
Carub.0004s0595 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2952838-2957837 Capsella rubella
Carub.0004s0595 10.0kb upstream 10.0kb upstream 11453 true scaffold_4: 2941385-2952837 Capsella rubella
Carub.0004s0595 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2941385-2951384 Capsella rubella
Carub.0004s0595 10.0kb downstream 10.0kb downstream 11453 true scaffold_4: 2951385-2962837 Capsella rubella
Carub.0004s0595 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2952838-2962837 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361974 5261 Brassicaceae View MSA
123832346 5264 Brassicales-Malvales View MSA
124343649 5266 SBM View MSA
124248292 5268 Malvidae View MSA
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain