Gene : Carub.0004s0851 C. rubella v1.1
Defline:  (1 of 1) 2.5.1.75//2.5.1.8 - tRNA dimethylallyltransferase / tRNA prenyltransferase // Transferred entry: 2.5.1.75 Genomic Order:  851
Name:  ? Carub.0004s0851 Secondary Identifier:  ? PAC:39236134
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2781 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0851 0.5kb upstream 0.5kb upstream 2980 true scaffold_4: 6203581-6206560 Capsella rubella
Carub.0004s0851 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6203581-6204080 Capsella rubella
Carub.0004s0851 0.5kb downstream 0.5kb downstream 2980 true scaffold_4: 6204081-6207060 Capsella rubella
Carub.0004s0851 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6206561-6207060 Capsella rubella
Carub.0004s0851 1.0kb upstream 1.0kb upstream 3480 true scaffold_4: 6203081-6206560 Capsella rubella
Carub.0004s0851 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6203081-6204080 Capsella rubella
Carub.0004s0851 1.0kb downstream 1.0kb downstream 3480 true scaffold_4: 6204081-6207560 Capsella rubella
Carub.0004s0851 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6206561-6207560 Capsella rubella
Carub.0004s0851 2.0kb upstream 2.0kb upstream 4480 true scaffold_4: 6202081-6206560 Capsella rubella
Carub.0004s0851 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6202081-6204080 Capsella rubella
Carub.0004s0851 2.0kb downstream 2.0kb downstream 4480 true scaffold_4: 6204081-6208560 Capsella rubella
Carub.0004s0851 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6206561-6208560 Capsella rubella
Carub.0004s0851 5.0kb upstream 5.0kb upstream 7480 true scaffold_4: 6199081-6206560 Capsella rubella
Carub.0004s0851 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6199081-6204080 Capsella rubella
Carub.0004s0851 5.0kb downstream 5.0kb downstream 7480 true scaffold_4: 6204081-6211560 Capsella rubella
Carub.0004s0851 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6206561-6211560 Capsella rubella
Carub.0004s0851 10.0kb upstream 10.0kb upstream 12480 true scaffold_4: 6194081-6206560 Capsella rubella
Carub.0004s0851 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6194081-6204080 Capsella rubella
Carub.0004s0851 10.0kb downstream 10.0kb downstream 12480 true scaffold_4: 6204081-6216560 Capsella rubella
Carub.0004s0851 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6206561-6216560 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368424 5261 Brassicaceae View MSA
123829881 5264 Brassicales-Malvales View MSA
124341186 5266 SBM View MSA
124237020 5268 Malvidae View MSA
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain