Gene : Carub.0004s0923 C. rubella v1.1

Defline:  (1 of 2) PTHR36310//PTHR36310:SF1 - FAMILY NOT NAMED // T6D22.11 Genomic Order:  923
Name:  ? Carub.0004s0923 Secondary Identifier:  ? PAC:39237407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0923 0.5kb upstream 0.5kb upstream 1328 true scaffold_4: 6647462-6648789 Capsella rubella
Carub.0004s0923 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6648290-6648789 Capsella rubella
Carub.0004s0923 0.5kb downstream 0.5kb downstream 1328 true scaffold_4: 6646962-6648289 Capsella rubella
Carub.0004s0923 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6646962-6647461 Capsella rubella
Carub.0004s0923 1.0kb upstream 1.0kb upstream 1828 true scaffold_4: 6647462-6649289 Capsella rubella
Carub.0004s0923 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6648290-6649289 Capsella rubella
Carub.0004s0923 1.0kb downstream 1.0kb downstream 1828 true scaffold_4: 6646462-6648289 Capsella rubella
Carub.0004s0923 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6646462-6647461 Capsella rubella
Carub.0004s0923 2.0kb upstream 2.0kb upstream 2828 true scaffold_4: 6647462-6650289 Capsella rubella
Carub.0004s0923 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6648290-6650289 Capsella rubella
Carub.0004s0923 2.0kb downstream 2.0kb downstream 2828 true scaffold_4: 6645462-6648289 Capsella rubella
Carub.0004s0923 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6645462-6647461 Capsella rubella
Carub.0004s0923 5.0kb upstream 5.0kb upstream 5828 true scaffold_4: 6647462-6653289 Capsella rubella
Carub.0004s0923 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6648290-6653289 Capsella rubella
Carub.0004s0923 5.0kb downstream 5.0kb downstream 5828 true scaffold_4: 6642462-6648289 Capsella rubella
Carub.0004s0923 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6642462-6647461 Capsella rubella
Carub.0004s0923 10.0kb upstream 10.0kb upstream 10828 true scaffold_4: 6647462-6658289 Capsella rubella
Carub.0004s0923 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6648290-6658289 Capsella rubella
Carub.0004s0923 10.0kb downstream 10.0kb downstream 10828 true scaffold_4: 6637462-6648289 Capsella rubella
Carub.0004s0923 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6637462-6647461 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028589 5273 Angiosperm View MSA
122376968 5261 Brassicaceae View MSA
123801410 5264 Brassicales-Malvales View MSA
124298718 5266 SBM View MSA
124252473 5268 Malvidae View MSA
124070165 5270 Rosid View MSA
123747367 5271 Pentapetalae View MSA
122797380 5272 Eudicot View MSA
121298053 5274 Embryophyte View MSA
123336056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain