Gene : Carub.0004s0948 C. rubella v1.1

Defline:  (1 of 7) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  948
Name:  ? Carub.0004s0948 Secondary Identifier:  ? PAC:39238678

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0948 0.5kb upstream 0.5kb upstream 2153 true scaffold_4: 6771241-6773393 Capsella rubella
Carub.0004s0948 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6772894-6773393 Capsella rubella
Carub.0004s0948 0.5kb downstream 0.5kb downstream 2153 true scaffold_4: 6770741-6772893 Capsella rubella
Carub.0004s0948 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6770741-6771240 Capsella rubella
Carub.0004s0948 1.0kb upstream 1.0kb upstream 2653 true scaffold_4: 6771241-6773893 Capsella rubella
Carub.0004s0948 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6772894-6773893 Capsella rubella
Carub.0004s0948 1.0kb downstream 1.0kb downstream 2653 true scaffold_4: 6770241-6772893 Capsella rubella
Carub.0004s0948 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6770241-6771240 Capsella rubella
Carub.0004s0948 2.0kb upstream 2.0kb upstream 3653 true scaffold_4: 6771241-6774893 Capsella rubella
Carub.0004s0948 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6772894-6774893 Capsella rubella
Carub.0004s0948 2.0kb downstream 2.0kb downstream 3653 true scaffold_4: 6769241-6772893 Capsella rubella
Carub.0004s0948 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6769241-6771240 Capsella rubella
Carub.0004s0948 5.0kb upstream 5.0kb upstream 6653 true scaffold_4: 6771241-6777893 Capsella rubella
Carub.0004s0948 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6772894-6777893 Capsella rubella
Carub.0004s0948 5.0kb downstream 5.0kb downstream 6653 true scaffold_4: 6766241-6772893 Capsella rubella
Carub.0004s0948 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6766241-6771240 Capsella rubella
Carub.0004s0948 10.0kb upstream 10.0kb upstream 11653 true scaffold_4: 6771241-6782893 Capsella rubella
Carub.0004s0948 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6772894-6782893 Capsella rubella
Carub.0004s0948 10.0kb downstream 10.0kb downstream 11653 true scaffold_4: 6761241-6772893 Capsella rubella
Carub.0004s0948 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6761241-6771240 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367383 5261 Brassicaceae View MSA
123837322 5264 Brassicales-Malvales View MSA
124346199 5266 SBM View MSA
124252714 5268 Malvidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain