Gene : Carub.0004s0767 C. rubella v1.1

Defline:  (1 of 2) PTHR11527:SF156 - HEAT SHOCK FAMILY PROTEIN Genomic Order:  767
Name:  ? Carub.0004s0767 Secondary Identifier:  ? PAC:39238864

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0767 0.5kb upstream 0.5kb upstream 1301 true scaffold_4: 5790716-5792016 Capsella rubella
Carub.0004s0767 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 5791517-5792016 Capsella rubella
Carub.0004s0767 0.5kb downstream 0.5kb downstream 1301 true scaffold_4: 5790216-5791516 Capsella rubella
Carub.0004s0767 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 5790216-5790715 Capsella rubella
Carub.0004s0767 1.0kb upstream 1.0kb upstream 1801 true scaffold_4: 5790716-5792516 Capsella rubella
Carub.0004s0767 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 5791517-5792516 Capsella rubella
Carub.0004s0767 1.0kb downstream 1.0kb downstream 1801 true scaffold_4: 5789716-5791516 Capsella rubella
Carub.0004s0767 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 5789716-5790715 Capsella rubella
Carub.0004s0767 2.0kb upstream 2.0kb upstream 2801 true scaffold_4: 5790716-5793516 Capsella rubella
Carub.0004s0767 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 5791517-5793516 Capsella rubella
Carub.0004s0767 2.0kb downstream 2.0kb downstream 2801 true scaffold_4: 5788716-5791516 Capsella rubella
Carub.0004s0767 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 5788716-5790715 Capsella rubella
Carub.0004s0767 5.0kb upstream 5.0kb upstream 5801 true scaffold_4: 5790716-5796516 Capsella rubella
Carub.0004s0767 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 5791517-5796516 Capsella rubella
Carub.0004s0767 5.0kb downstream 5.0kb downstream 5801 true scaffold_4: 5785716-5791516 Capsella rubella
Carub.0004s0767 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 5785716-5790715 Capsella rubella
Carub.0004s0767 10.0kb upstream 10.0kb upstream 10801 true scaffold_4: 5790716-5801516 Capsella rubella
Carub.0004s0767 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 5791517-5801516 Capsella rubella
Carub.0004s0767 10.0kb downstream 10.0kb downstream 10801 true scaffold_4: 5780716-5791516 Capsella rubella
Carub.0004s0767 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 5780716-5790715 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368812 5261 Brassicaceae View MSA
123835384 5264 Brassicales-Malvales View MSA
124322042 5266 SBM View MSA
124247177 5268 Malvidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain