Gene : Carub.0004s0826 C. rubella v1.1
Defline:  (1 of 1) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) Genomic Order:  826
Name:  ? Carub.0004s0826 Secondary Identifier:  ? PAC:39236782
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0826 0.5kb upstream 0.5kb upstream 4621 true scaffold_4: 6114060-6118680 Capsella rubella
Carub.0004s0826 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 6114060-6114559 Capsella rubella
Carub.0004s0826 0.5kb downstream 0.5kb downstream 4621 true scaffold_4: 6114560-6119180 Capsella rubella
Carub.0004s0826 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 6118681-6119180 Capsella rubella
Carub.0004s0826 1.0kb upstream 1.0kb upstream 5121 true scaffold_4: 6113560-6118680 Capsella rubella
Carub.0004s0826 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 6113560-6114559 Capsella rubella
Carub.0004s0826 1.0kb downstream 1.0kb downstream 5121 true scaffold_4: 6114560-6119680 Capsella rubella
Carub.0004s0826 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 6118681-6119680 Capsella rubella
Carub.0004s0826 2.0kb upstream 2.0kb upstream 6121 true scaffold_4: 6112560-6118680 Capsella rubella
Carub.0004s0826 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 6112560-6114559 Capsella rubella
Carub.0004s0826 2.0kb downstream 2.0kb downstream 6121 true scaffold_4: 6114560-6120680 Capsella rubella
Carub.0004s0826 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 6118681-6120680 Capsella rubella
Carub.0004s0826 5.0kb upstream 5.0kb upstream 9121 true scaffold_4: 6109560-6118680 Capsella rubella
Carub.0004s0826 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 6109560-6114559 Capsella rubella
Carub.0004s0826 5.0kb downstream 5.0kb downstream 9121 true scaffold_4: 6114560-6123680 Capsella rubella
Carub.0004s0826 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 6118681-6123680 Capsella rubella
Carub.0004s0826 10.0kb upstream 10.0kb upstream 14121 true scaffold_4: 6104560-6118680 Capsella rubella
Carub.0004s0826 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 6104560-6114559 Capsella rubella
Carub.0004s0826 10.0kb downstream 10.0kb downstream 14121 true scaffold_4: 6114560-6128680 Capsella rubella
Carub.0004s0826 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6118681-6128680 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040967 5273 Angiosperm View MSA
122365363 5261 Brassicaceae View MSA
123838634 5264 Brassicales-Malvales View MSA
124345021 5266 SBM View MSA
124239151 5268 Malvidae View MSA
124065448 5270 Rosid View MSA
123749867 5271 Pentapetalae View MSA
122796132 5272 Eudicot View MSA
121350779 5274 Embryophyte View MSA
123428117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain