Gene : Carub.0004s1104 C. rubella v1.1
Defline:  (1 of 3) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  1104
Name:  ? Carub.0004s1104 Secondary Identifier:  ? PAC:39237121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1104 0.5kb upstream 0.5kb upstream 2114 true scaffold_4: 7420847-7422960 Capsella rubella
Carub.0004s1104 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7422461-7422960 Capsella rubella
Carub.0004s1104 0.5kb downstream 0.5kb downstream 2114 true scaffold_4: 7420347-7422460 Capsella rubella
Carub.0004s1104 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7420347-7420846 Capsella rubella
Carub.0004s1104 1.0kb upstream 1.0kb upstream 2614 true scaffold_4: 7420847-7423460 Capsella rubella
Carub.0004s1104 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7422461-7423460 Capsella rubella
Carub.0004s1104 1.0kb downstream 1.0kb downstream 2614 true scaffold_4: 7419847-7422460 Capsella rubella
Carub.0004s1104 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7419847-7420846 Capsella rubella
Carub.0004s1104 2.0kb upstream 2.0kb upstream 3614 true scaffold_4: 7420847-7424460 Capsella rubella
Carub.0004s1104 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7422461-7424460 Capsella rubella
Carub.0004s1104 2.0kb downstream 2.0kb downstream 3614 true scaffold_4: 7418847-7422460 Capsella rubella
Carub.0004s1104 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7418847-7420846 Capsella rubella
Carub.0004s1104 5.0kb upstream 5.0kb upstream 6614 true scaffold_4: 7420847-7427460 Capsella rubella
Carub.0004s1104 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7422461-7427460 Capsella rubella
Carub.0004s1104 5.0kb downstream 5.0kb downstream 6614 true scaffold_4: 7415847-7422460 Capsella rubella
Carub.0004s1104 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7415847-7420846 Capsella rubella
Carub.0004s1104 10.0kb upstream 10.0kb upstream 11614 true scaffold_4: 7420847-7432460 Capsella rubella
Carub.0004s1104 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7422461-7432460 Capsella rubella
Carub.0004s1104 10.0kb downstream 10.0kb downstream 11614 true scaffold_4: 7410847-7422460 Capsella rubella
Carub.0004s1104 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7410847-7420846 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370188 5261 Brassicaceae View MSA
123835455 5264 Brassicales-Malvales View MSA
124342562 5266 SBM View MSA
124240718 5268 Malvidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain