Gene : Carub.0004s1126 C. rubella v1.1
Defline:  (1 of 2) PTHR31165//PTHR31165:SF6 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Genomic Order:  1126
Name:  ? Carub.0004s1126 Secondary Identifier:  ? PAC:39238507
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1126 0.5kb upstream 0.5kb upstream 1910 true scaffold_4: 7537414-7539323 Capsella rubella
Carub.0004s1126 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7537414-7537913 Capsella rubella
Carub.0004s1126 0.5kb downstream 0.5kb downstream 1910 true scaffold_4: 7537914-7539823 Capsella rubella
Carub.0004s1126 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7539324-7539823 Capsella rubella
Carub.0004s1126 1.0kb upstream 1.0kb upstream 2410 true scaffold_4: 7536914-7539323 Capsella rubella
Carub.0004s1126 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7536914-7537913 Capsella rubella
Carub.0004s1126 1.0kb downstream 1.0kb downstream 2410 true scaffold_4: 7537914-7540323 Capsella rubella
Carub.0004s1126 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7539324-7540323 Capsella rubella
Carub.0004s1126 2.0kb upstream 2.0kb upstream 3410 true scaffold_4: 7535914-7539323 Capsella rubella
Carub.0004s1126 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7535914-7537913 Capsella rubella
Carub.0004s1126 2.0kb downstream 2.0kb downstream 3410 true scaffold_4: 7537914-7541323 Capsella rubella
Carub.0004s1126 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7539324-7541323 Capsella rubella
Carub.0004s1126 5.0kb upstream 5.0kb upstream 6410 true scaffold_4: 7532914-7539323 Capsella rubella
Carub.0004s1126 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7532914-7537913 Capsella rubella
Carub.0004s1126 5.0kb downstream 5.0kb downstream 6410 true scaffold_4: 7537914-7544323 Capsella rubella
Carub.0004s1126 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7539324-7544323 Capsella rubella
Carub.0004s1126 10.0kb upstream 10.0kb upstream 11410 true scaffold_4: 7527914-7539323 Capsella rubella
Carub.0004s1126 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7527914-7537913 Capsella rubella
Carub.0004s1126 10.0kb downstream 10.0kb downstream 11410 true scaffold_4: 7537914-7549323 Capsella rubella
Carub.0004s1126 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7539324-7549323 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377748 5261 Brassicaceae View MSA
123801623 5264 Brassicales-Malvales View MSA
124349732 5266 SBM View MSA
124237471 5268 Malvidae View MSA
124067272 5270 Rosid View MSA
123741885 5271 Pentapetalae View MSA
122789357 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain