Gene : Carub.0004s1161 C. rubella v1.1
Defline:  (1 of 3) K03100 - signal peptidase I (lepB) Genomic Order:  1161
Name:  ? Carub.0004s1161 Secondary Identifier:  ? PAC:39237209
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1161 0.5kb upstream 0.5kb upstream 2839 true scaffold_4: 7675190-7678028 Capsella rubella
Carub.0004s1161 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7675190-7675689 Capsella rubella
Carub.0004s1161 0.5kb downstream 0.5kb downstream 2839 true scaffold_4: 7675690-7678528 Capsella rubella
Carub.0004s1161 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7678029-7678528 Capsella rubella
Carub.0004s1161 1.0kb upstream 1.0kb upstream 3339 true scaffold_4: 7674690-7678028 Capsella rubella
Carub.0004s1161 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7674690-7675689 Capsella rubella
Carub.0004s1161 1.0kb downstream 1.0kb downstream 3339 true scaffold_4: 7675690-7679028 Capsella rubella
Carub.0004s1161 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7678029-7679028 Capsella rubella
Carub.0004s1161 2.0kb upstream 2.0kb upstream 4339 true scaffold_4: 7673690-7678028 Capsella rubella
Carub.0004s1161 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7673690-7675689 Capsella rubella
Carub.0004s1161 2.0kb downstream 2.0kb downstream 4339 true scaffold_4: 7675690-7680028 Capsella rubella
Carub.0004s1161 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7678029-7680028 Capsella rubella
Carub.0004s1161 5.0kb upstream 5.0kb upstream 7339 true scaffold_4: 7670690-7678028 Capsella rubella
Carub.0004s1161 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7670690-7675689 Capsella rubella
Carub.0004s1161 5.0kb downstream 5.0kb downstream 7339 true scaffold_4: 7675690-7683028 Capsella rubella
Carub.0004s1161 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7678029-7683028 Capsella rubella
Carub.0004s1161 10.0kb upstream 10.0kb upstream 12339 true scaffold_4: 7665690-7678028 Capsella rubella
Carub.0004s1161 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7665690-7675689 Capsella rubella
Carub.0004s1161 10.0kb downstream 10.0kb downstream 12339 true scaffold_4: 7675690-7688028 Capsella rubella
Carub.0004s1161 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7678029-7688028 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377072 5261 Brassicaceae View MSA
123801433 5264 Brassicales-Malvales View MSA
124346815 5266 SBM View MSA
124237216 5268 Malvidae View MSA
124066317 5270 Rosid View MSA
123747244 5271 Pentapetalae View MSA
122789106 5272 Eudicot View MSA
122046589 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain