Gene : Carub.0004s0988 C. rubella v1.1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF351 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 23-RELATED Genomic Order:  988
Name:  ? Carub.0004s0988 Secondary Identifier:  ? PAC:39237394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0988 0.5kb upstream 0.5kb upstream 3113 true scaffold_4: 7008378-7011490 Capsella rubella
Carub.0004s0988 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7010991-7011490 Capsella rubella
Carub.0004s0988 0.5kb downstream 0.5kb downstream 3113 true scaffold_4: 7007878-7010990 Capsella rubella
Carub.0004s0988 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7007878-7008377 Capsella rubella
Carub.0004s0988 1.0kb upstream 1.0kb upstream 3613 true scaffold_4: 7008378-7011990 Capsella rubella
Carub.0004s0988 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7010991-7011990 Capsella rubella
Carub.0004s0988 1.0kb downstream 1.0kb downstream 3613 true scaffold_4: 7007378-7010990 Capsella rubella
Carub.0004s0988 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7007378-7008377 Capsella rubella
Carub.0004s0988 2.0kb upstream 2.0kb upstream 4613 true scaffold_4: 7008378-7012990 Capsella rubella
Carub.0004s0988 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7010991-7012990 Capsella rubella
Carub.0004s0988 2.0kb downstream 2.0kb downstream 4613 true scaffold_4: 7006378-7010990 Capsella rubella
Carub.0004s0988 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7006378-7008377 Capsella rubella
Carub.0004s0988 5.0kb upstream 5.0kb upstream 7613 true scaffold_4: 7008378-7015990 Capsella rubella
Carub.0004s0988 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7010991-7015990 Capsella rubella
Carub.0004s0988 5.0kb downstream 5.0kb downstream 7613 true scaffold_4: 7003378-7010990 Capsella rubella
Carub.0004s0988 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7003378-7008377 Capsella rubella
Carub.0004s0988 10.0kb upstream 10.0kb upstream 12613 true scaffold_4: 7008378-7020990 Capsella rubella
Carub.0004s0988 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7010991-7020990 Capsella rubella
Carub.0004s0988 10.0kb downstream 10.0kb downstream 12613 true scaffold_4: 6998378-7010990 Capsella rubella
Carub.0004s0988 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 6998378-7008377 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122374417 5261 Brassicaceae View MSA
123837877 5264 Brassicales-Malvales View MSA
124345351 5266 SBM View MSA
124253044 5268 Malvidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain