Gene : Carub.0004s1005 C. rubella v1.1
Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1005
Name:  ? Carub.0004s1005 Secondary Identifier:  ? PAC:39237769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1005 0.5kb upstream 0.5kb upstream 3330 true scaffold_4: 7087751-7091080 Capsella rubella
Carub.0004s1005 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7087751-7088250 Capsella rubella
Carub.0004s1005 0.5kb downstream 0.5kb downstream 3330 true scaffold_4: 7088251-7091580 Capsella rubella
Carub.0004s1005 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7091081-7091580 Capsella rubella
Carub.0004s1005 1.0kb upstream 1.0kb upstream 3830 true scaffold_4: 7087251-7091080 Capsella rubella
Carub.0004s1005 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7087251-7088250 Capsella rubella
Carub.0004s1005 1.0kb downstream 1.0kb downstream 3830 true scaffold_4: 7088251-7092080 Capsella rubella
Carub.0004s1005 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7091081-7092080 Capsella rubella
Carub.0004s1005 2.0kb upstream 2.0kb upstream 4830 true scaffold_4: 7086251-7091080 Capsella rubella
Carub.0004s1005 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7086251-7088250 Capsella rubella
Carub.0004s1005 2.0kb downstream 2.0kb downstream 4830 true scaffold_4: 7088251-7093080 Capsella rubella
Carub.0004s1005 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7091081-7093080 Capsella rubella
Carub.0004s1005 5.0kb upstream 5.0kb upstream 7830 true scaffold_4: 7083251-7091080 Capsella rubella
Carub.0004s1005 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7083251-7088250 Capsella rubella
Carub.0004s1005 5.0kb downstream 5.0kb downstream 7830 true scaffold_4: 7088251-7096080 Capsella rubella
Carub.0004s1005 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7091081-7096080 Capsella rubella
Carub.0004s1005 10.0kb upstream 10.0kb upstream 12830 true scaffold_4: 7078251-7091080 Capsella rubella
Carub.0004s1005 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7078251-7088250 Capsella rubella
Carub.0004s1005 10.0kb downstream 10.0kb downstream 12830 true scaffold_4: 7088251-7101080 Capsella rubella
Carub.0004s1005 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7091081-7101080 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368780 5261 Brassicaceae View MSA
123799655 5264 Brassicales-Malvales View MSA
124297153 5266 SBM View MSA
124149113 5268 Malvidae View MSA
123874984 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain