Gene : Carub.0004s1006 C. rubella v1.1
Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1006
Name:  ? Carub.0004s1006 Secondary Identifier:  ? PAC:39236966
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1006 0.5kb upstream 0.5kb upstream 2862 true scaffold_4: 7091055-7093916 Capsella rubella
Carub.0004s1006 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7091055-7091554 Capsella rubella
Carub.0004s1006 0.5kb downstream 0.5kb downstream 2862 true scaffold_4: 7091555-7094416 Capsella rubella
Carub.0004s1006 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7093917-7094416 Capsella rubella
Carub.0004s1006 1.0kb upstream 1.0kb upstream 3362 true scaffold_4: 7090555-7093916 Capsella rubella
Carub.0004s1006 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7090555-7091554 Capsella rubella
Carub.0004s1006 1.0kb downstream 1.0kb downstream 3362 true scaffold_4: 7091555-7094916 Capsella rubella
Carub.0004s1006 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7093917-7094916 Capsella rubella
Carub.0004s1006 2.0kb upstream 2.0kb upstream 4362 true scaffold_4: 7089555-7093916 Capsella rubella
Carub.0004s1006 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7089555-7091554 Capsella rubella
Carub.0004s1006 2.0kb downstream 2.0kb downstream 4362 true scaffold_4: 7091555-7095916 Capsella rubella
Carub.0004s1006 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7093917-7095916 Capsella rubella
Carub.0004s1006 5.0kb upstream 5.0kb upstream 7362 true scaffold_4: 7086555-7093916 Capsella rubella
Carub.0004s1006 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7086555-7091554 Capsella rubella
Carub.0004s1006 5.0kb downstream 5.0kb downstream 7362 true scaffold_4: 7091555-7098916 Capsella rubella
Carub.0004s1006 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7093917-7098916 Capsella rubella
Carub.0004s1006 10.0kb upstream 10.0kb upstream 12362 true scaffold_4: 7081555-7093916 Capsella rubella
Carub.0004s1006 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7081555-7091554 Capsella rubella
Carub.0004s1006 10.0kb downstream 10.0kb downstream 12362 true scaffold_4: 7091555-7103916 Capsella rubella
Carub.0004s1006 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7093917-7103916 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370079 5261 Brassicaceae View MSA
123799895 5264 Brassicales-Malvales View MSA
124297368 5266 SBM View MSA
124149279 5268 Malvidae View MSA
123875117 5270 Rosid View MSA
123458994 5271 Pentapetalae View MSA
122494390 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain