Gene : Carub.0004s1024 C. rubella v1.1
Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Genomic Order:  1024
Name:  ? Carub.0004s1024 Secondary Identifier:  ? PAC:39235916
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1024 0.5kb upstream 0.5kb upstream 4041 true scaffold_4: 7160139-7164179 Capsella rubella
Carub.0004s1024 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7160139-7160638 Capsella rubella
Carub.0004s1024 0.5kb downstream 0.5kb downstream 4041 true scaffold_4: 7160639-7164679 Capsella rubella
Carub.0004s1024 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7164180-7164679 Capsella rubella
Carub.0004s1024 1.0kb upstream 1.0kb upstream 4541 true scaffold_4: 7159639-7164179 Capsella rubella
Carub.0004s1024 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7159639-7160638 Capsella rubella
Carub.0004s1024 1.0kb downstream 1.0kb downstream 4541 true scaffold_4: 7160639-7165179 Capsella rubella
Carub.0004s1024 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7164180-7165179 Capsella rubella
Carub.0004s1024 2.0kb upstream 2.0kb upstream 5541 true scaffold_4: 7158639-7164179 Capsella rubella
Carub.0004s1024 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7158639-7160638 Capsella rubella
Carub.0004s1024 2.0kb downstream 2.0kb downstream 5541 true scaffold_4: 7160639-7166179 Capsella rubella
Carub.0004s1024 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7164180-7166179 Capsella rubella
Carub.0004s1024 5.0kb upstream 5.0kb upstream 8541 true scaffold_4: 7155639-7164179 Capsella rubella
Carub.0004s1024 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7155639-7160638 Capsella rubella
Carub.0004s1024 5.0kb downstream 5.0kb downstream 8541 true scaffold_4: 7160639-7169179 Capsella rubella
Carub.0004s1024 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7164180-7169179 Capsella rubella
Carub.0004s1024 10.0kb upstream 10.0kb upstream 13541 true scaffold_4: 7150639-7164179 Capsella rubella
Carub.0004s1024 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7150639-7160638 Capsella rubella
Carub.0004s1024 10.0kb downstream 10.0kb downstream 13541 true scaffold_4: 7160639-7174179 Capsella rubella
Carub.0004s1024 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7164180-7174179 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335682 5261 Brassicaceae Singleton cluster - no MSA
123776438 5264 Brassicales-Malvales Singleton cluster - no MSA
124274829 5266 SBM Singleton cluster - no MSA
124252736 5268 Malvidae View MSA
124062879 5270 Rosid View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain