Gene : Carub.0004s1057 C. rubella v1.1
Defline:  (1 of 3) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1057
Name:  ? Carub.0004s1057 Secondary Identifier:  ? PAC:39237611
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1057 0.5kb upstream 0.5kb upstream 3354 true scaffold_4: 7251869-7255222 Capsella rubella
Carub.0004s1057 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7251869-7252368 Capsella rubella
Carub.0004s1057 0.5kb downstream 0.5kb downstream 3354 true scaffold_4: 7252369-7255722 Capsella rubella
Carub.0004s1057 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7255223-7255722 Capsella rubella
Carub.0004s1057 1.0kb upstream 1.0kb upstream 3854 true scaffold_4: 7251369-7255222 Capsella rubella
Carub.0004s1057 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7251369-7252368 Capsella rubella
Carub.0004s1057 1.0kb downstream 1.0kb downstream 3854 true scaffold_4: 7252369-7256222 Capsella rubella
Carub.0004s1057 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7255223-7256222 Capsella rubella
Carub.0004s1057 2.0kb upstream 2.0kb upstream 4854 true scaffold_4: 7250369-7255222 Capsella rubella
Carub.0004s1057 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7250369-7252368 Capsella rubella
Carub.0004s1057 2.0kb downstream 2.0kb downstream 4854 true scaffold_4: 7252369-7257222 Capsella rubella
Carub.0004s1057 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7255223-7257222 Capsella rubella
Carub.0004s1057 5.0kb upstream 5.0kb upstream 7854 true scaffold_4: 7247369-7255222 Capsella rubella
Carub.0004s1057 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7247369-7252368 Capsella rubella
Carub.0004s1057 5.0kb downstream 5.0kb downstream 7854 true scaffold_4: 7252369-7260222 Capsella rubella
Carub.0004s1057 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7255223-7260222 Capsella rubella
Carub.0004s1057 10.0kb upstream 10.0kb upstream 12854 true scaffold_4: 7242369-7255222 Capsella rubella
Carub.0004s1057 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7242369-7252368 Capsella rubella
Carub.0004s1057 10.0kb downstream 10.0kb downstream 12854 true scaffold_4: 7252369-7265222 Capsella rubella
Carub.0004s1057 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7255223-7265222 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375817 5261 Brassicaceae View MSA
123838533 5264 Brassicales-Malvales View MSA
124344275 5266 SBM View MSA
124243094 5268 Malvidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain