Gene : Carub.0004s1085 C. rubella v1.1
Defline:  (1 of 2) 2.4.1.128 - Scopoletin glucosyltransferase Genomic Order:  1085
Name:  ? Carub.0004s1085 Secondary Identifier:  ? PAC:39236644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7186 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1085 0.5kb upstream 0.5kb upstream 1943 true scaffold_4: 7329369-7331311 Capsella rubella
Carub.0004s1085 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7329369-7329868 Capsella rubella
Carub.0004s1085 0.5kb downstream 0.5kb downstream 1943 true scaffold_4: 7329869-7331811 Capsella rubella
Carub.0004s1085 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7331312-7331811 Capsella rubella
Carub.0004s1085 1.0kb upstream 1.0kb upstream 2443 true scaffold_4: 7328869-7331311 Capsella rubella
Carub.0004s1085 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7328869-7329868 Capsella rubella
Carub.0004s1085 1.0kb downstream 1.0kb downstream 2443 true scaffold_4: 7329869-7332311 Capsella rubella
Carub.0004s1085 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7331312-7332311 Capsella rubella
Carub.0004s1085 2.0kb upstream 2.0kb upstream 3443 true scaffold_4: 7327869-7331311 Capsella rubella
Carub.0004s1085 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7327869-7329868 Capsella rubella
Carub.0004s1085 2.0kb downstream 2.0kb downstream 3443 true scaffold_4: 7329869-7333311 Capsella rubella
Carub.0004s1085 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7331312-7333311 Capsella rubella
Carub.0004s1085 5.0kb upstream 5.0kb upstream 6443 true scaffold_4: 7324869-7331311 Capsella rubella
Carub.0004s1085 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7324869-7329868 Capsella rubella
Carub.0004s1085 5.0kb downstream 5.0kb downstream 6443 true scaffold_4: 7329869-7336311 Capsella rubella
Carub.0004s1085 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7331312-7336311 Capsella rubella
Carub.0004s1085 10.0kb upstream 10.0kb upstream 11443 true scaffold_4: 7319869-7331311 Capsella rubella
Carub.0004s1085 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7319869-7329868 Capsella rubella
Carub.0004s1085 10.0kb downstream 10.0kb downstream 11443 true scaffold_4: 7329869-7341311 Capsella rubella
Carub.0004s1085 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7331312-7341311 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379743 5261 Brassicaceae View MSA
123802398 5264 Brassicales-Malvales View MSA
124299596 5266 SBM View MSA
124150969 5268 Malvidae View MSA
123876494 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain