Gene : Carub.0004s1323 C. rubella v1.1

Genomic Order:  1323 Name:  ? Carub.0004s1323
Secondary Identifier:  ? PAC:39236772

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1323 0.5kb upstream 0.5kb upstream 944 true scaffold_4: 8354540-8355483 Capsella rubella
Carub.0004s1323 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8354540-8355039 Capsella rubella
Carub.0004s1323 0.5kb downstream 0.5kb downstream 944 true scaffold_4: 8355040-8355983 Capsella rubella
Carub.0004s1323 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8355484-8355983 Capsella rubella
Carub.0004s1323 1.0kb upstream 1.0kb upstream 1444 true scaffold_4: 8354040-8355483 Capsella rubella
Carub.0004s1323 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8354040-8355039 Capsella rubella
Carub.0004s1323 1.0kb downstream 1.0kb downstream 1444 true scaffold_4: 8355040-8356483 Capsella rubella
Carub.0004s1323 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8355484-8356483 Capsella rubella
Carub.0004s1323 2.0kb upstream 2.0kb upstream 2444 true scaffold_4: 8353040-8355483 Capsella rubella
Carub.0004s1323 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8353040-8355039 Capsella rubella
Carub.0004s1323 2.0kb downstream 2.0kb downstream 2444 true scaffold_4: 8355040-8357483 Capsella rubella
Carub.0004s1323 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8355484-8357483 Capsella rubella
Carub.0004s1323 5.0kb upstream 5.0kb upstream 5444 true scaffold_4: 8350040-8355483 Capsella rubella
Carub.0004s1323 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8350040-8355039 Capsella rubella
Carub.0004s1323 5.0kb downstream 5.0kb downstream 5444 true scaffold_4: 8355040-8360483 Capsella rubella
Carub.0004s1323 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8355484-8360483 Capsella rubella
Carub.0004s1323 10.0kb upstream 10.0kb upstream 10444 true scaffold_4: 8345040-8355483 Capsella rubella
Carub.0004s1323 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8345040-8355039 Capsella rubella
Carub.0004s1323 10.0kb downstream 10.0kb downstream 10444 true scaffold_4: 8355040-8365483 Capsella rubella
Carub.0004s1323 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8355484-8365483 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791744 5273 Angiosperm View MSA
122376143 5261 Brassicaceae View MSA
123835084 5264 Brassicales-Malvales View MSA
124339079 5266 SBM View MSA
124247649 5268 Malvidae View MSA
124071028 5270 Rosid View MSA
123742101 5271 Pentapetalae View MSA
122788839 5272 Eudicot View MSA
121063043 5274 Embryophyte View MSA
123102829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain