Gene : Carub.0004s1379 C. rubella v1.1
Defline:  (1 of 2) 1.14.13.79 - Ent-kaurenoic acid oxidase Genomic Order:  1379
Name:  ? Carub.0004s1379 Secondary Identifier:  ? PAC:39235892
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5034 Capsella rubella pathologic  
Crubella PWY-5053 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1379 0.5kb upstream 0.5kb upstream 3948 true scaffold_4: 8560380-8564327 Capsella rubella
Carub.0004s1379 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8560380-8560879 Capsella rubella
Carub.0004s1379 0.5kb downstream 0.5kb downstream 3948 true scaffold_4: 8560880-8564827 Capsella rubella
Carub.0004s1379 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8564328-8564827 Capsella rubella
Carub.0004s1379 1.0kb upstream 1.0kb upstream 4448 true scaffold_4: 8559880-8564327 Capsella rubella
Carub.0004s1379 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8559880-8560879 Capsella rubella
Carub.0004s1379 1.0kb downstream 1.0kb downstream 4448 true scaffold_4: 8560880-8565327 Capsella rubella
Carub.0004s1379 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8564328-8565327 Capsella rubella
Carub.0004s1379 2.0kb upstream 2.0kb upstream 5448 true scaffold_4: 8558880-8564327 Capsella rubella
Carub.0004s1379 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8558880-8560879 Capsella rubella
Carub.0004s1379 2.0kb downstream 2.0kb downstream 5448 true scaffold_4: 8560880-8566327 Capsella rubella
Carub.0004s1379 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8564328-8566327 Capsella rubella
Carub.0004s1379 5.0kb upstream 5.0kb upstream 8448 true scaffold_4: 8555880-8564327 Capsella rubella
Carub.0004s1379 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8555880-8560879 Capsella rubella
Carub.0004s1379 5.0kb downstream 5.0kb downstream 8448 true scaffold_4: 8560880-8569327 Capsella rubella
Carub.0004s1379 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8564328-8569327 Capsella rubella
Carub.0004s1379 10.0kb upstream 10.0kb upstream 13448 true scaffold_4: 8550880-8564327 Capsella rubella
Carub.0004s1379 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8550880-8560879 Capsella rubella
Carub.0004s1379 10.0kb downstream 10.0kb downstream 13448 true scaffold_4: 8560880-8574327 Capsella rubella
Carub.0004s1379 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8564328-8574327 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374011 5261 Brassicaceae View MSA
123837829 5264 Brassicales-Malvales View MSA
124342155 5266 SBM View MSA
124242971 5268 Malvidae View MSA
124073300 5270 Rosid View MSA
123751539 5271 Pentapetalae View MSA
122792552 5272 Eudicot View MSA
122051699 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121312618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain