Gene : Carub.0004s1380 C. rubella v1.1
Defline:  (1 of 2) PTHR23083//PTHR23083:SF380 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  1380
Name:  ? Carub.0004s1380 Secondary Identifier:  ? PAC:39237344
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1380 0.5kb upstream 0.5kb upstream 3908 true scaffold_4: 8563837-8567744 Capsella rubella
Carub.0004s1380 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8563837-8564336 Capsella rubella
Carub.0004s1380 0.5kb downstream 0.5kb downstream 3908 true scaffold_4: 8564337-8568244 Capsella rubella
Carub.0004s1380 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8567745-8568244 Capsella rubella
Carub.0004s1380 1.0kb upstream 1.0kb upstream 4408 true scaffold_4: 8563337-8567744 Capsella rubella
Carub.0004s1380 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8563337-8564336 Capsella rubella
Carub.0004s1380 1.0kb downstream 1.0kb downstream 4408 true scaffold_4: 8564337-8568744 Capsella rubella
Carub.0004s1380 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8567745-8568744 Capsella rubella
Carub.0004s1380 2.0kb upstream 2.0kb upstream 5408 true scaffold_4: 8562337-8567744 Capsella rubella
Carub.0004s1380 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8562337-8564336 Capsella rubella
Carub.0004s1380 2.0kb downstream 2.0kb downstream 5408 true scaffold_4: 8564337-8569744 Capsella rubella
Carub.0004s1380 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8567745-8569744 Capsella rubella
Carub.0004s1380 5.0kb upstream 5.0kb upstream 8408 true scaffold_4: 8559337-8567744 Capsella rubella
Carub.0004s1380 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8559337-8564336 Capsella rubella
Carub.0004s1380 5.0kb downstream 5.0kb downstream 8408 true scaffold_4: 8564337-8572744 Capsella rubella
Carub.0004s1380 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8567745-8572744 Capsella rubella
Carub.0004s1380 10.0kb upstream 10.0kb upstream 13408 true scaffold_4: 8554337-8567744 Capsella rubella
Carub.0004s1380 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8554337-8564336 Capsella rubella
Carub.0004s1380 10.0kb downstream 10.0kb downstream 13408 true scaffold_4: 8564337-8577744 Capsella rubella
Carub.0004s1380 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8567745-8577744 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376265 5261 Brassicaceae View MSA
123837177 5264 Brassicales-Malvales View MSA
124340827 5266 SBM View MSA
124238713 5268 Malvidae View MSA
124068399 5270 Rosid View MSA
123739608 5271 Pentapetalae View MSA
122792397 5272 Eudicot View MSA
122043324 5273 Angiosperm View MSA
121346107 5274 Embryophyte View MSA
123380332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain