Gene : Carub.0004s1378 C. rubella v1.1
Defline:  (1 of 2) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1378
Name:  ? Carub.0004s1378 Secondary Identifier:  ? PAC:39239109
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1378 0.5kb upstream 0.5kb upstream 4029 true scaffold_4: 8556713-8560741 Capsella rubella
Carub.0004s1378 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8556713-8557212 Capsella rubella
Carub.0004s1378 0.5kb downstream 0.5kb downstream 4029 true scaffold_4: 8557213-8561241 Capsella rubella
Carub.0004s1378 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8560742-8561241 Capsella rubella
Carub.0004s1378 1.0kb upstream 1.0kb upstream 4529 true scaffold_4: 8556213-8560741 Capsella rubella
Carub.0004s1378 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8556213-8557212 Capsella rubella
Carub.0004s1378 1.0kb downstream 1.0kb downstream 4529 true scaffold_4: 8557213-8561741 Capsella rubella
Carub.0004s1378 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8560742-8561741 Capsella rubella
Carub.0004s1378 2.0kb upstream 2.0kb upstream 5529 true scaffold_4: 8555213-8560741 Capsella rubella
Carub.0004s1378 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8555213-8557212 Capsella rubella
Carub.0004s1378 2.0kb downstream 2.0kb downstream 5529 true scaffold_4: 8557213-8562741 Capsella rubella
Carub.0004s1378 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8560742-8562741 Capsella rubella
Carub.0004s1378 5.0kb upstream 5.0kb upstream 8529 true scaffold_4: 8552213-8560741 Capsella rubella
Carub.0004s1378 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8552213-8557212 Capsella rubella
Carub.0004s1378 5.0kb downstream 5.0kb downstream 8529 true scaffold_4: 8557213-8565741 Capsella rubella
Carub.0004s1378 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8560742-8565741 Capsella rubella
Carub.0004s1378 10.0kb upstream 10.0kb upstream 13529 true scaffold_4: 8547213-8560741 Capsella rubella
Carub.0004s1378 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8547213-8557212 Capsella rubella
Carub.0004s1378 10.0kb downstream 10.0kb downstream 13529 true scaffold_4: 8557213-8570741 Capsella rubella
Carub.0004s1378 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8560742-8570741 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378363 5261 Brassicaceae View MSA
123840170 5264 Brassicales-Malvales View MSA
124337008 5266 SBM View MSA
124246736 5268 Malvidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain