Gene : Carub.0004s1272 C. rubella v1.1
Defline:  (1 of 1) PF01713//PF13041//PF13812 - Smr domain (Smr) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1272
Name:  ? Carub.0004s1272 Secondary Identifier:  ? PAC:39237207
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1272 0.5kb upstream 0.5kb upstream 4148 true scaffold_4: 8169079-8173226 Capsella rubella
Carub.0004s1272 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8172727-8173226 Capsella rubella
Carub.0004s1272 0.5kb downstream 0.5kb downstream 4148 true scaffold_4: 8168579-8172726 Capsella rubella
Carub.0004s1272 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8168579-8169078 Capsella rubella
Carub.0004s1272 1.0kb upstream 1.0kb upstream 4648 true scaffold_4: 8169079-8173726 Capsella rubella
Carub.0004s1272 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8172727-8173726 Capsella rubella
Carub.0004s1272 1.0kb downstream 1.0kb downstream 4648 true scaffold_4: 8168079-8172726 Capsella rubella
Carub.0004s1272 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8168079-8169078 Capsella rubella
Carub.0004s1272 2.0kb upstream 2.0kb upstream 5648 true scaffold_4: 8169079-8174726 Capsella rubella
Carub.0004s1272 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8172727-8174726 Capsella rubella
Carub.0004s1272 2.0kb downstream 2.0kb downstream 5648 true scaffold_4: 8167079-8172726 Capsella rubella
Carub.0004s1272 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8167079-8169078 Capsella rubella
Carub.0004s1272 5.0kb upstream 5.0kb upstream 8648 true scaffold_4: 8169079-8177726 Capsella rubella
Carub.0004s1272 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8172727-8177726 Capsella rubella
Carub.0004s1272 5.0kb downstream 5.0kb downstream 8648 true scaffold_4: 8164079-8172726 Capsella rubella
Carub.0004s1272 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8164079-8169078 Capsella rubella
Carub.0004s1272 10.0kb upstream 10.0kb upstream 13648 true scaffold_4: 8169079-8182726 Capsella rubella
Carub.0004s1272 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8172727-8182726 Capsella rubella
Carub.0004s1272 10.0kb downstream 10.0kb downstream 13648 true scaffold_4: 8159079-8172726 Capsella rubella
Carub.0004s1272 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8159079-8169078 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376162 5261 Brassicaceae View MSA
123838700 5264 Brassicales-Malvales View MSA
124345402 5266 SBM View MSA
124253596 5268 Malvidae View MSA
124061005 5270 Rosid View MSA
123740775 5271 Pentapetalae View MSA
122785854 5272 Eudicot View MSA
122042693 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346514 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain