Gene : Carub.0004s1412 C. rubella v1.1
Defline:  (1 of 2) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  1412
Name:  ? Carub.0004s1412 Secondary Identifier:  ? PAC:39236655
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1412 0.5kb upstream 0.5kb upstream 3324 true scaffold_4: 8694110-8697433 Capsella rubella
Carub.0004s1412 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8694110-8694609 Capsella rubella
Carub.0004s1412 0.5kb downstream 0.5kb downstream 3324 true scaffold_4: 8694610-8697933 Capsella rubella
Carub.0004s1412 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8697434-8697933 Capsella rubella
Carub.0004s1412 1.0kb upstream 1.0kb upstream 3824 true scaffold_4: 8693610-8697433 Capsella rubella
Carub.0004s1412 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8693610-8694609 Capsella rubella
Carub.0004s1412 1.0kb downstream 1.0kb downstream 3824 true scaffold_4: 8694610-8698433 Capsella rubella
Carub.0004s1412 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8697434-8698433 Capsella rubella
Carub.0004s1412 2.0kb upstream 2.0kb upstream 4824 true scaffold_4: 8692610-8697433 Capsella rubella
Carub.0004s1412 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8692610-8694609 Capsella rubella
Carub.0004s1412 2.0kb downstream 2.0kb downstream 4824 true scaffold_4: 8694610-8699433 Capsella rubella
Carub.0004s1412 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8697434-8699433 Capsella rubella
Carub.0004s1412 5.0kb upstream 5.0kb upstream 7824 true scaffold_4: 8689610-8697433 Capsella rubella
Carub.0004s1412 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8689610-8694609 Capsella rubella
Carub.0004s1412 5.0kb downstream 5.0kb downstream 7824 true scaffold_4: 8694610-8702433 Capsella rubella
Carub.0004s1412 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8697434-8702433 Capsella rubella
Carub.0004s1412 10.0kb upstream 10.0kb upstream 12824 true scaffold_4: 8684610-8697433 Capsella rubella
Carub.0004s1412 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8684610-8694609 Capsella rubella
Carub.0004s1412 10.0kb downstream 10.0kb downstream 12824 true scaffold_4: 8694610-8707433 Capsella rubella
Carub.0004s1412 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8697434-8707433 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363696 5261 Brassicaceae View MSA
123827535 5264 Brassicales-Malvales View MSA
124346287 5266 SBM View MSA
124237580 5268 Malvidae View MSA
124072580 5270 Rosid View MSA
123738961 5271 Pentapetalae View MSA
122769939 5272 Eudicot View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain