Gene : Carub.0004s1458 C. rubella v1.1
Defline:  (1 of 3) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  1458
Name:  ? Carub.0004s1458 Secondary Identifier:  ? PAC:39238493
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5136 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-6435 Capsella rubella pathologic  
Crubella PWY-735 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1458 0.5kb upstream 0.5kb upstream 3978 true scaffold_4: 8859135-8863112 Capsella rubella
Carub.0004s1458 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8862613-8863112 Capsella rubella
Carub.0004s1458 0.5kb downstream 0.5kb downstream 3978 true scaffold_4: 8858635-8862612 Capsella rubella
Carub.0004s1458 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8858635-8859134 Capsella rubella
Carub.0004s1458 1.0kb upstream 1.0kb upstream 4478 true scaffold_4: 8859135-8863612 Capsella rubella
Carub.0004s1458 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8862613-8863612 Capsella rubella
Carub.0004s1458 1.0kb downstream 1.0kb downstream 4478 true scaffold_4: 8858135-8862612 Capsella rubella
Carub.0004s1458 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8858135-8859134 Capsella rubella
Carub.0004s1458 2.0kb upstream 2.0kb upstream 5478 true scaffold_4: 8859135-8864612 Capsella rubella
Carub.0004s1458 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8862613-8864612 Capsella rubella
Carub.0004s1458 2.0kb downstream 2.0kb downstream 5478 true scaffold_4: 8857135-8862612 Capsella rubella
Carub.0004s1458 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8857135-8859134 Capsella rubella
Carub.0004s1458 5.0kb upstream 5.0kb upstream 8478 true scaffold_4: 8859135-8867612 Capsella rubella
Carub.0004s1458 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8862613-8867612 Capsella rubella
Carub.0004s1458 5.0kb downstream 5.0kb downstream 8478 true scaffold_4: 8854135-8862612 Capsella rubella
Carub.0004s1458 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8854135-8859134 Capsella rubella
Carub.0004s1458 10.0kb upstream 10.0kb upstream 13478 true scaffold_4: 8859135-8872612 Capsella rubella
Carub.0004s1458 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8862613-8872612 Capsella rubella
Carub.0004s1458 10.0kb downstream 10.0kb downstream 13478 true scaffold_4: 8849135-8862612 Capsella rubella
Carub.0004s1458 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8849135-8859134 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376255 5261 Brassicaceae View MSA
123828476 5264 Brassicales-Malvales View MSA
124344876 5266 SBM View MSA
124242182 5268 Malvidae View MSA
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain