Gene : Carub.0004s1478 C. rubella v1.1
Defline:  (1 of 3) PTHR15664 - C20ORF30 PROTEIN Genomic Order:  1478
Name:  ? Carub.0004s1478 Secondary Identifier:  ? PAC:39236863
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1478 0.5kb upstream 0.5kb upstream 2204 true scaffold_4: 8931093-8933296 Capsella rubella
Carub.0004s1478 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8931093-8931592 Capsella rubella
Carub.0004s1478 0.5kb downstream 0.5kb downstream 2204 true scaffold_4: 8931593-8933796 Capsella rubella
Carub.0004s1478 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8933297-8933796 Capsella rubella
Carub.0004s1478 1.0kb upstream 1.0kb upstream 2704 true scaffold_4: 8930593-8933296 Capsella rubella
Carub.0004s1478 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8930593-8931592 Capsella rubella
Carub.0004s1478 1.0kb downstream 1.0kb downstream 2704 true scaffold_4: 8931593-8934296 Capsella rubella
Carub.0004s1478 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8933297-8934296 Capsella rubella
Carub.0004s1478 2.0kb upstream 2.0kb upstream 3704 true scaffold_4: 8929593-8933296 Capsella rubella
Carub.0004s1478 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8929593-8931592 Capsella rubella
Carub.0004s1478 2.0kb downstream 2.0kb downstream 3704 true scaffold_4: 8931593-8935296 Capsella rubella
Carub.0004s1478 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8933297-8935296 Capsella rubella
Carub.0004s1478 5.0kb upstream 5.0kb upstream 6704 true scaffold_4: 8926593-8933296 Capsella rubella
Carub.0004s1478 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8926593-8931592 Capsella rubella
Carub.0004s1478 5.0kb downstream 5.0kb downstream 6704 true scaffold_4: 8931593-8938296 Capsella rubella
Carub.0004s1478 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8933297-8938296 Capsella rubella
Carub.0004s1478 10.0kb upstream 10.0kb upstream 11704 true scaffold_4: 8921593-8933296 Capsella rubella
Carub.0004s1478 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8921593-8931592 Capsella rubella
Carub.0004s1478 10.0kb downstream 10.0kb downstream 11704 true scaffold_4: 8931593-8943296 Capsella rubella
Carub.0004s1478 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8933297-8943296 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372853 5261 Brassicaceae View MSA
123832103 5264 Brassicales-Malvales View MSA
124338552 5266 SBM View MSA
124254369 5268 Malvidae View MSA
124062671 5270 Rosid View MSA
123747758 5271 Pentapetalae View MSA
122788490 5272 Eudicot View MSA
122042918 5273 Angiosperm View MSA
121351470 5274 Embryophyte View MSA
123427818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain