Gene : Carub.0004s1784 C. rubella v1.1
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1784
Name:  ? Carub.0004s1784 Secondary Identifier:  ? PAC:39238112
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1784 0.5kb upstream 0.5kb upstream 1416 true scaffold_4: 10105848-10107263 Capsella rubella
Carub.0004s1784 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10106764-10107263 Capsella rubella
Carub.0004s1784 0.5kb downstream 0.5kb downstream 1416 true scaffold_4: 10105348-10106763 Capsella rubella
Carub.0004s1784 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10105348-10105847 Capsella rubella
Carub.0004s1784 1.0kb upstream 1.0kb upstream 1916 true scaffold_4: 10105848-10107763 Capsella rubella
Carub.0004s1784 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10106764-10107763 Capsella rubella
Carub.0004s1784 1.0kb downstream 1.0kb downstream 1916 true scaffold_4: 10104848-10106763 Capsella rubella
Carub.0004s1784 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10104848-10105847 Capsella rubella
Carub.0004s1784 2.0kb upstream 2.0kb upstream 2916 true scaffold_4: 10105848-10108763 Capsella rubella
Carub.0004s1784 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10106764-10108763 Capsella rubella
Carub.0004s1784 2.0kb downstream 2.0kb downstream 2916 true scaffold_4: 10103848-10106763 Capsella rubella
Carub.0004s1784 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10103848-10105847 Capsella rubella
Carub.0004s1784 5.0kb upstream 5.0kb upstream 5916 true scaffold_4: 10105848-10111763 Capsella rubella
Carub.0004s1784 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10106764-10111763 Capsella rubella
Carub.0004s1784 5.0kb downstream 5.0kb downstream 5916 true scaffold_4: 10100848-10106763 Capsella rubella
Carub.0004s1784 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10100848-10105847 Capsella rubella
Carub.0004s1784 10.0kb upstream 10.0kb upstream 10916 true scaffold_4: 10105848-10116763 Capsella rubella
Carub.0004s1784 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10106764-10116763 Capsella rubella
Carub.0004s1784 10.0kb downstream 10.0kb downstream 10916 true scaffold_4: 10095848-10106763 Capsella rubella
Carub.0004s1784 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10095848-10105847 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360171 5261 Brassicaceae View MSA
123797902 5264 Brassicales-Malvales View MSA
124295601 5266 SBM View MSA
124147993 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain