Gene : Carub.0004s1822 C. rubella v1.1
Defline:  (1 of 8) PTHR21470 - NTKL-BINDING PROTEIN 1 Genomic Order:  1822
Name:  ? Carub.0004s1822 Secondary Identifier:  ? PAC:39239030
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1822 0.5kb upstream 0.5kb upstream 2053 true scaffold_4: 10247732-10249784 Capsella rubella
Carub.0004s1822 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10247732-10248231 Capsella rubella
Carub.0004s1822 0.5kb downstream 0.5kb downstream 2053 true scaffold_4: 10248232-10250284 Capsella rubella
Carub.0004s1822 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10249785-10250284 Capsella rubella
Carub.0004s1822 1.0kb upstream 1.0kb upstream 2553 true scaffold_4: 10247232-10249784 Capsella rubella
Carub.0004s1822 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10247232-10248231 Capsella rubella
Carub.0004s1822 1.0kb downstream 1.0kb downstream 2553 true scaffold_4: 10248232-10250784 Capsella rubella
Carub.0004s1822 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10249785-10250784 Capsella rubella
Carub.0004s1822 2.0kb upstream 2.0kb upstream 3553 true scaffold_4: 10246232-10249784 Capsella rubella
Carub.0004s1822 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10246232-10248231 Capsella rubella
Carub.0004s1822 2.0kb downstream 2.0kb downstream 3553 true scaffold_4: 10248232-10251784 Capsella rubella
Carub.0004s1822 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10249785-10251784 Capsella rubella
Carub.0004s1822 5.0kb upstream 5.0kb upstream 6553 true scaffold_4: 10243232-10249784 Capsella rubella
Carub.0004s1822 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10243232-10248231 Capsella rubella
Carub.0004s1822 5.0kb downstream 5.0kb downstream 6553 true scaffold_4: 10248232-10254784 Capsella rubella
Carub.0004s1822 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10249785-10254784 Capsella rubella
Carub.0004s1822 10.0kb upstream 10.0kb upstream 11553 true scaffold_4: 10238232-10249784 Capsella rubella
Carub.0004s1822 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10238232-10248231 Capsella rubella
Carub.0004s1822 10.0kb downstream 10.0kb downstream 11553 true scaffold_4: 10248232-10259784 Capsella rubella
Carub.0004s1822 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10249785-10259784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375670 5261 Brassicaceae View MSA
123801018 5264 Brassicales-Malvales View MSA
124298365 5266 SBM View MSA
124245895 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain