Gene : Carub.0004s1829 C. rubella v1.1
Defline:  (1 of 3) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  1829
Name:  ? Carub.0004s1829 Secondary Identifier:  ? PAC:39236085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1829 0.5kb upstream 0.5kb upstream 6228 true scaffold_4: 10272600-10278827 Capsella rubella
Carub.0004s1829 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10278328-10278827 Capsella rubella
Carub.0004s1829 0.5kb downstream 0.5kb downstream 6228 true scaffold_4: 10272100-10278327 Capsella rubella
Carub.0004s1829 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10272100-10272599 Capsella rubella
Carub.0004s1829 1.0kb upstream 1.0kb upstream 6728 true scaffold_4: 10272600-10279327 Capsella rubella
Carub.0004s1829 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10278328-10279327 Capsella rubella
Carub.0004s1829 1.0kb downstream 1.0kb downstream 6728 true scaffold_4: 10271600-10278327 Capsella rubella
Carub.0004s1829 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10271600-10272599 Capsella rubella
Carub.0004s1829 2.0kb upstream 2.0kb upstream 7728 true scaffold_4: 10272600-10280327 Capsella rubella
Carub.0004s1829 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10278328-10280327 Capsella rubella
Carub.0004s1829 2.0kb downstream 2.0kb downstream 7728 true scaffold_4: 10270600-10278327 Capsella rubella
Carub.0004s1829 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10270600-10272599 Capsella rubella
Carub.0004s1829 5.0kb upstream 5.0kb upstream 10728 true scaffold_4: 10272600-10283327 Capsella rubella
Carub.0004s1829 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10278328-10283327 Capsella rubella
Carub.0004s1829 5.0kb downstream 5.0kb downstream 10728 true scaffold_4: 10267600-10278327 Capsella rubella
Carub.0004s1829 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10267600-10272599 Capsella rubella
Carub.0004s1829 10.0kb upstream 10.0kb upstream 15728 true scaffold_4: 10272600-10288327 Capsella rubella
Carub.0004s1829 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10278328-10288327 Capsella rubella
Carub.0004s1829 10.0kb downstream 10.0kb downstream 15728 true scaffold_4: 10262600-10278327 Capsella rubella
Carub.0004s1829 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10262600-10272599 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370108 5261 Brassicaceae View MSA
123828666 5264 Brassicales-Malvales View MSA
124336456 5266 SBM View MSA
124250997 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain