Gene : Carub.0004s1696 C. rubella v1.1
Defline:  (1 of 8) PF02517 - CAAX protease self-immunity (Abi) Genomic Order:  1696
Name:  ? Carub.0004s1696 Secondary Identifier:  ? PAC:39239070
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1696 0.5kb upstream 0.5kb upstream 2930 true scaffold_4: 9778853-9781782 Capsella rubella
Carub.0004s1696 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9778853-9779352 Capsella rubella
Carub.0004s1696 0.5kb downstream 0.5kb downstream 2930 true scaffold_4: 9779353-9782282 Capsella rubella
Carub.0004s1696 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9781783-9782282 Capsella rubella
Carub.0004s1696 1.0kb upstream 1.0kb upstream 3430 true scaffold_4: 9778353-9781782 Capsella rubella
Carub.0004s1696 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9778353-9779352 Capsella rubella
Carub.0004s1696 1.0kb downstream 1.0kb downstream 3430 true scaffold_4: 9779353-9782782 Capsella rubella
Carub.0004s1696 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9781783-9782782 Capsella rubella
Carub.0004s1696 2.0kb upstream 2.0kb upstream 4430 true scaffold_4: 9777353-9781782 Capsella rubella
Carub.0004s1696 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9777353-9779352 Capsella rubella
Carub.0004s1696 2.0kb downstream 2.0kb downstream 4430 true scaffold_4: 9779353-9783782 Capsella rubella
Carub.0004s1696 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9781783-9783782 Capsella rubella
Carub.0004s1696 5.0kb upstream 5.0kb upstream 7430 true scaffold_4: 9774353-9781782 Capsella rubella
Carub.0004s1696 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9774353-9779352 Capsella rubella
Carub.0004s1696 5.0kb downstream 5.0kb downstream 7430 true scaffold_4: 9779353-9786782 Capsella rubella
Carub.0004s1696 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9781783-9786782 Capsella rubella
Carub.0004s1696 10.0kb upstream 10.0kb upstream 12430 true scaffold_4: 9769353-9781782 Capsella rubella
Carub.0004s1696 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9769353-9779352 Capsella rubella
Carub.0004s1696 10.0kb downstream 10.0kb downstream 12430 true scaffold_4: 9779353-9791782 Capsella rubella
Carub.0004s1696 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9781783-9791782 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363849 5261 Brassicaceae View MSA
123831566 5264 Brassicales-Malvales View MSA
124343326 5266 SBM View MSA
124241562 5268 Malvidae View MSA
124067074 5270 Rosid View MSA
123746065 5271 Pentapetalae View MSA
122791545 5272 Eudicot View MSA
122045418 5273 Angiosperm View MSA
121347772 5274 Embryophyte View MSA
123380622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain