Gene : Carub.0004s1722 C. rubella v1.1

Defline:  (1 of 5) K09060 - plant G-box-binding factor (GBF) Genomic Order:  1722
Name:  ? Carub.0004s1722 Secondary Identifier:  ? PAC:39238879

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1722 0.5kb upstream 0.5kb upstream 4313 true scaffold_4: 9856269-9860581 Capsella rubella
Carub.0004s1722 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9860082-9860581 Capsella rubella
Carub.0004s1722 0.5kb downstream 0.5kb downstream 4313 true scaffold_4: 9855769-9860081 Capsella rubella
Carub.0004s1722 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9855769-9856268 Capsella rubella
Carub.0004s1722 1.0kb upstream 1.0kb upstream 4813 true scaffold_4: 9856269-9861081 Capsella rubella
Carub.0004s1722 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9860082-9861081 Capsella rubella
Carub.0004s1722 1.0kb downstream 1.0kb downstream 4813 true scaffold_4: 9855269-9860081 Capsella rubella
Carub.0004s1722 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9855269-9856268 Capsella rubella
Carub.0004s1722 2.0kb upstream 2.0kb upstream 5813 true scaffold_4: 9856269-9862081 Capsella rubella
Carub.0004s1722 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9860082-9862081 Capsella rubella
Carub.0004s1722 2.0kb downstream 2.0kb downstream 5813 true scaffold_4: 9854269-9860081 Capsella rubella
Carub.0004s1722 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9854269-9856268 Capsella rubella
Carub.0004s1722 5.0kb upstream 5.0kb upstream 8813 true scaffold_4: 9856269-9865081 Capsella rubella
Carub.0004s1722 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9860082-9865081 Capsella rubella
Carub.0004s1722 5.0kb downstream 5.0kb downstream 8813 true scaffold_4: 9851269-9860081 Capsella rubella
Carub.0004s1722 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9851269-9856268 Capsella rubella
Carub.0004s1722 10.0kb upstream 10.0kb upstream 13813 true scaffold_4: 9856269-9870081 Capsella rubella
Carub.0004s1722 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9860082-9870081 Capsella rubella
Carub.0004s1722 10.0kb downstream 10.0kb downstream 13813 true scaffold_4: 9846269-9860081 Capsella rubella
Carub.0004s1722 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9846269-9856268 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367705 5261 Brassicaceae View MSA
123832574 5264 Brassicales-Malvales View MSA
124343577 5266 SBM View MSA
124238814 5268 Malvidae View MSA
124060566 5270 Rosid View MSA
123744057 5271 Pentapetalae View MSA
122787821 5272 Eudicot View MSA
122047221 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121351466 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain