Gene : Carub.0004s2007 C. rubella v1.1
Defline:  (1 of 4) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  2007
Name:  ? Carub.0004s2007 Secondary Identifier:  ? PAC:39238055
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2007 0.5kb upstream 0.5kb upstream 2276 true scaffold_4: 11012085-11014360 Capsella rubella
Carub.0004s2007 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11013861-11014360 Capsella rubella
Carub.0004s2007 0.5kb downstream 0.5kb downstream 2276 true scaffold_4: 11011585-11013860 Capsella rubella
Carub.0004s2007 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11011585-11012084 Capsella rubella
Carub.0004s2007 1.0kb upstream 1.0kb upstream 2776 true scaffold_4: 11012085-11014860 Capsella rubella
Carub.0004s2007 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11013861-11014860 Capsella rubella
Carub.0004s2007 1.0kb downstream 1.0kb downstream 2776 true scaffold_4: 11011085-11013860 Capsella rubella
Carub.0004s2007 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11011085-11012084 Capsella rubella
Carub.0004s2007 2.0kb upstream 2.0kb upstream 3776 true scaffold_4: 11012085-11015860 Capsella rubella
Carub.0004s2007 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11013861-11015860 Capsella rubella
Carub.0004s2007 2.0kb downstream 2.0kb downstream 3776 true scaffold_4: 11010085-11013860 Capsella rubella
Carub.0004s2007 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11010085-11012084 Capsella rubella
Carub.0004s2007 5.0kb upstream 5.0kb upstream 6776 true scaffold_4: 11012085-11018860 Capsella rubella
Carub.0004s2007 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11013861-11018860 Capsella rubella
Carub.0004s2007 5.0kb downstream 5.0kb downstream 6776 true scaffold_4: 11007085-11013860 Capsella rubella
Carub.0004s2007 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11007085-11012084 Capsella rubella
Carub.0004s2007 10.0kb upstream 10.0kb upstream 11776 true scaffold_4: 11012085-11023860 Capsella rubella
Carub.0004s2007 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11013861-11023860 Capsella rubella
Carub.0004s2007 10.0kb downstream 10.0kb downstream 11776 true scaffold_4: 11002085-11013860 Capsella rubella
Carub.0004s2007 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11002085-11012084 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370487 5261 Brassicaceae View MSA
123799974 5264 Brassicales-Malvales View MSA
124338475 5266 SBM View MSA
124180889 5268 Malvidae View MSA
124074847 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain