Gene : Carub.0004s2006 C. rubella v1.1
Defline:  (1 of 8) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  2006
Name:  ? Carub.0004s2006 Secondary Identifier:  ? PAC:39238953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2006 0.5kb upstream 0.5kb upstream 2911 true scaffold_4: 11007916-11010826 Capsella rubella
Carub.0004s2006 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11007916-11008415 Capsella rubella
Carub.0004s2006 0.5kb downstream 0.5kb downstream 2911 true scaffold_4: 11008416-11011326 Capsella rubella
Carub.0004s2006 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11010827-11011326 Capsella rubella
Carub.0004s2006 1.0kb upstream 1.0kb upstream 3411 true scaffold_4: 11007416-11010826 Capsella rubella
Carub.0004s2006 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11007416-11008415 Capsella rubella
Carub.0004s2006 1.0kb downstream 1.0kb downstream 3411 true scaffold_4: 11008416-11011826 Capsella rubella
Carub.0004s2006 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11010827-11011826 Capsella rubella
Carub.0004s2006 2.0kb upstream 2.0kb upstream 4411 true scaffold_4: 11006416-11010826 Capsella rubella
Carub.0004s2006 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11006416-11008415 Capsella rubella
Carub.0004s2006 2.0kb downstream 2.0kb downstream 4411 true scaffold_4: 11008416-11012826 Capsella rubella
Carub.0004s2006 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11010827-11012826 Capsella rubella
Carub.0004s2006 5.0kb upstream 5.0kb upstream 7411 true scaffold_4: 11003416-11010826 Capsella rubella
Carub.0004s2006 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11003416-11008415 Capsella rubella
Carub.0004s2006 5.0kb downstream 5.0kb downstream 7411 true scaffold_4: 11008416-11015826 Capsella rubella
Carub.0004s2006 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11010827-11015826 Capsella rubella
Carub.0004s2006 10.0kb upstream 10.0kb upstream 12411 true scaffold_4: 10998416-11010826 Capsella rubella
Carub.0004s2006 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10998416-11008415 Capsella rubella
Carub.0004s2006 10.0kb downstream 10.0kb downstream 12411 true scaffold_4: 11008416-11020826 Capsella rubella
Carub.0004s2006 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11010827-11020826 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380867 5261 Brassicaceae View MSA
123835302 5264 Brassicales-Malvales View MSA
124343598 5266 SBM View MSA
124253264 5268 Malvidae View MSA
124062847 5270 Rosid View MSA
123748936 5271 Pentapetalae View MSA
122794649 5272 Eudicot View MSA
122047094 5273 Angiosperm View MSA
121310689 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain